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The map label for this gene is yjeB [C]

Identifier: 103486976

GI number: 103486976

Start: 1554464

End: 1554907

Strand: Direct

Name: yjeB [C]

Synonym: Sala_1491

Alternate gene names: 103486976

Gene position: 1554464-1554907 (Clockwise)

Preceding gene: 103486972

Following gene: 103486978

Centisome position: 46.47

GC content: 64.41

Gene sequence:

>444_bases
ATGCTCTCGCAGAAGACCCGCTATACGATCCGCGCGTTCCAGCATCTTGCCGACCATTGGGGCAGGGGGCAGGTCCAGCT
TGCGGACATCGCCGAGGCGCAGAATATCCCGCCCAAGTTCCTGACCGTCATCCTGTCCGAAATGGCGCGCGAGGGGCTGT
TGATTTCGCAGCGCGGCCGCGACGGAGGTTATCAGCTTGCGCTGCCTCCCGTCGACATCAGCTATGGCGACCTCGTCCGC
CTGACGCGCGGGTCGCTGGCGCTCGTCCCCTGCGCCGCACGCAACGCGCACGAACATTGCAAGAATTGCCTGCCCGAAGC
CGAATGCCGACTCCGCAGCCTGATGTTGAAGGTGCGCGACGAGACCGCATCGATCCTCGACCGCATCACGCTGGCCGACC
CGATCGAACTCGAACCCGTTTTCGAGACCGAAGCAGCGGCCTGA

Upstream 100 bases:

>100_bases
TATCGCCGAAGCATGCCACCCGCTGTGATTTTCATCAACCGTGCAACTTATCTCATCCTGACAGGTTGAATTAAGGCGGA
TTATGTCACACTAAGCCGCC

Downstream 100 bases:

>100_bases
AAGCCTCCACTCGCCGCATAGCAAAAGGCCCGCGATCGCGGGCCTTTCCAGAAAAATGGTGGAGCCTAGCGGGATCGAAC
CGCTGACCTCCTGCATGCCA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLSQKTRYTIRAFQHLADHWGRGQVQLADIAEAQNIPPKFLTVILSEMAREGLLISQRGRDGGYQLALPPVDISYGDLVR
LTRGSLALVPCAARNAHEHCKNCLPEAECRLRSLMLKVRDETASILDRITLADPIELEPVFETEAAA

Sequences:

>Translated_147_residues
MLSQKTRYTIRAFQHLADHWGRGQVQLADIAEAQNIPPKFLTVILSEMAREGLLISQRGRDGGYQLALPPVDISYGDLVR
LTRGSLALVPCAARNAHEHCKNCLPEAECRLRSLMLKVRDETASILDRITLADPIELEPVFETEAAA
>Mature_147_residues
MLSQKTRYTIRAFQHLADHWGRGQVQLADIAEAQNIPPKFLTVILSEMAREGLLISQRGRDGGYQLALPPVDISYGDLVR
LTRGSLALVPCAARNAHEHCKNCLPEAECRLRSLMLKVRDETASILDRITLADPIELEPVFETEAAA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16348; Mature: 16348

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQKTRYTIRAFQHLADHWGRGQVQLADIAEAQNIPPKFLTVILSEMAREGLLISQRGR
CCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCC
DGGYQLALPPVDISYGDLVRLTRGSLALVPCAARNAHEHCKNCLPEAECRLRSLMLKVRD
CCCEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
ETASILDRITLADPIELEPVFETEAAA
HHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSQKTRYTIRAFQHLADHWGRGQVQLADIAEAQNIPPKFLTVILSEMAREGLLISQRGR
CCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCC
DGGYQLALPPVDISYGDLVRLTRGSLALVPCAARNAHEHCKNCLPEAECRLRSLMLKVRD
CCCEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
ETASILDRITLADPIELEPVFETEAAA
HHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]