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The map label for this gene is fbcH [H]

Identifier: 103486829

GI number: 103486829

Start: 1403264

End: 1404073

Strand: Reverse

Name: fbcH [H]

Synonym: Sala_1343

Alternate gene names: 103486829

Gene position: 1404073-1403264 (Counterclockwise)

Preceding gene: 103486830

Following gene: 103486828

Centisome position: 41.97

GC content: 61.6

Gene sequence:

>810_bases
ATGGTTCGTCCGCTCGGTTTTCTCGTCGGCCTGGGTTTCATCACGGCGCTCGTCTTTGCGATCTTCACCACGCCGCTGAA
GAATGAACCCAATGTCGCCCATAGTTTCGTCAAGCACCCAAGGCATCTGAAGCTGGCAAGCGACGGCCTGATGCCGCACT
GGGATCTGGCGCAGCTTCAGCGCGGGATGCAGGTGTACAAGGAGGTCTGCTCGGCCTGCCACAGCCTCAATCTCGTCGCC
TTCCGCAACATTCAGGATCTGGGCTACACAGAAGGCCAGGTGAAGAGTTTCGCCAAGGGTTTCCAGGTGCCGTCGATCAA
CCCCGACACGGGTGAACCGGCGACGCGCGACGGGCTGCCCTCGGATCATTTCCCGGCGCCCTATGCGAACGAGGTCGCGG
CGCGCGCGGCAAACAACAATGCGCTGCCGCCCGACCTGTCGCTGATCACCAAGGCGCGCGAAGGCGGCAAGGATTATGTC
TATTCGCTGCTGACGGGCTATCAGAATCCCCCCGCCAACCTGCCGAAGGAACTGCGTCCGGGCACGGGGCTGCATTACAA
CCCCTATTTCCCCAACCTGAACCTGGCGATGGCGAAGCCGCTGTCCGACGGGCAGGTGACCTATGCCGACGGCACCAGGG
CAACGGTCGATCAGATGGCGAAGGACGTGACCGCTTTCCTCGTCTGGACCGCGGAGCCCAAGCTGGTGAAGCGGGTGCAG
GTGGGTTGGGCCGTGATCGGCTTCCTGCTGATCTTTACCGTGCTGACCTATTTGTCGTACCGCAACATCTGGGCCGACAA
GAAGCATTGA

Upstream 100 bases:

>100_bases
ATGCCGAAATCGATCACGGAAGCGGTCCTTGCAAAGCATGCCGACGACAAGTCGGCGGCCACGGCCTGAGCGCCGGACAT
TTATAGGAGCTGATACAGCC

Downstream 100 bases:

>100_bases
GTGCCGCGGAGGGCGACCGGTTGATGATCGCCCTCCCGCCGCAGCCGGATCTCGACCTTGCGTCGCTGGTCCGCACCATC
CCCGATTTTCCCAGGCCGGG

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MVRPLGFLVGLGFITALVFAIFTTPLKNEPNVAHSFVKHPRHLKLASDGLMPHWDLAQLQRGMQVYKEVCSACHSLNLVA
FRNIQDLGYTEGQVKSFAKGFQVPSINPDTGEPATRDGLPSDHFPAPYANEVAARAANNNALPPDLSLITKAREGGKDYV
YSLLTGYQNPPANLPKELRPGTGLHYNPYFPNLNLAMAKPLSDGQVTYADGTRATVDQMAKDVTAFLVWTAEPKLVKRVQ
VGWAVIGFLLIFTVLTYLSYRNIWADKKH

Sequences:

>Translated_269_residues
MVRPLGFLVGLGFITALVFAIFTTPLKNEPNVAHSFVKHPRHLKLASDGLMPHWDLAQLQRGMQVYKEVCSACHSLNLVA
FRNIQDLGYTEGQVKSFAKGFQVPSINPDTGEPATRDGLPSDHFPAPYANEVAARAANNNALPPDLSLITKAREGGKDYV
YSLLTGYQNPPANLPKELRPGTGLHYNPYFPNLNLAMAKPLSDGQVTYADGTRATVDQMAKDVTAFLVWTAEPKLVKRVQ
VGWAVIGFLLIFTVLTYLSYRNIWADKKH
>Mature_269_residues
MVRPLGFLVGLGFITALVFAIFTTPLKNEPNVAHSFVKHPRHLKLASDGLMPHWDLAQLQRGMQVYKEVCSACHSLNLVA
FRNIQDLGYTEGQVKSFAKGFQVPSINPDTGEPATRDGLPSDHFPAPYANEVAARAANNNALPPDLSLITKAREGGKDYV
YSLLTGYQNPPANLPKELRPGTGLHYNPYFPNLNLAMAKPLSDGQVTYADGTRATVDQMAKDVTAFLVWTAEPKLVKRVQ
VGWAVIGFLLIFTVLTYLSYRNIWADKKH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI21359867, Length=227, Percent_Identity=43.6123348017621, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17506225, Length=266, Percent_Identity=38.7218045112782, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6324639, Length=264, Percent_Identity=43.9393939393939, Blast_Score=195, Evalue=7e-51,
Organism=Drosophila melanogaster, GI24658292, Length=262, Percent_Identity=44.2748091603053, Blast_Score=189, Evalue=1e-48,
Organism=Drosophila melanogaster, GI21358225, Length=229, Percent_Identity=45.4148471615721, Blast_Score=173, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N; PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 29706; Mature: 29706

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPLGFLVGLGFITALVFAIFTTPLKNEPNVAHSFVKHPRHLKLASDGLMPHWDLAQLQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHH
RGMQVYKEVCSACHSLNLVAFRNIQDLGYTEGQVKSFAKGFQVPSINPDTGEPATRDGLP
HHHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SDHFPAPYANEVAARAANNNALPPDLSLITKAREGGKDYVYSLLTGYQNPPANLPKELRP
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCC
GTGLHYNPYFPNLNLAMAKPLSDGQVTYADGTRATVDQMAKDVTAFLVWTAEPKLVKRVQ
CCCCCCCCCCCCCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHEEECCCHHHHHHHH
VGWAVIGFLLIFTVLTYLSYRNIWADKKH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVRPLGFLVGLGFITALVFAIFTTPLKNEPNVAHSFVKHPRHLKLASDGLMPHWDLAQLQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHH
RGMQVYKEVCSACHSLNLVAFRNIQDLGYTEGQVKSFAKGFQVPSINPDTGEPATRDGLP
HHHHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SDHFPAPYANEVAARAANNNALPPDLSLITKAREGGKDYVYSLLTGYQNPPANLPKELRP
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCC
GTGLHYNPYFPNLNLAMAKPLSDGQVTYADGTRATVDQMAKDVTAFLVWTAEPKLVKRVQ
CCCCCCCCCCCCCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHEEECCCHHHHHHHH
VGWAVIGFLLIFTVLTYLSYRNIWADKKH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2541921; 12597275 [H]