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The map label for this gene is petB [H]

Identifier: 103486830

GI number: 103486830

Start: 1404105

End: 1405385

Strand: Reverse

Name: petB [H]

Synonym: Sala_1344

Alternate gene names: 103486830

Gene position: 1405385-1404105 (Counterclockwise)

Preceding gene: 103486831

Following gene: 103486829

Centisome position: 42.01

GC content: 60.19

Gene sequence:

>1281_bases
ATGAGCTTTCCCTGGGCCAAGCAATATGAACCCCAGCAGCCGCTGATGAAGTGGCTGGACGAGAAGCTGCCGCTGCCGCG
CCTCGTCTATAACGCGATCGGCGCCGGTTATCCTGTGCCCCGAAATCTCAACTATTTCTGGAACTTCGGCGTCCTCGCCG
GCGCTGCGCTGGTGATTCAGATCGTCACCGGCATCGTGCTCGCGATGCACTATGCCGCCAACGCCGGGGTCGCGTTCAAT
TCGGTCGAGCATATCATGCGCGACGTGAACGCCGGCTGGTTCATCCGCTATGCGCACATGAACGGCGCCAGCATGTTCTT
CATCGTCGTTTATCTGCACATTTTCCGCGGCCTTTATTACGGGTCGTACAAGGCGCCGCGCGAAATGGTGTGGCTCCTCG
GCGTCGTGATTTTCCTGCTGATGATGGCCACCGCCTTCATGGGCTATGTGCTTCCCTGGGGCCAGATGAGCTTCTGGGGC
GCGCAGGTGATCACCGGTTTCTTCTCGGCGATCCCGATGGTCGGCGAACCGATCCGCCAGTGGCTGCTCGGCGGTTTTGC
GCCCGACAATGCGGCGCTCAACCGCTTCTTCTCGCTGCACTATCTGCTGCCCTTCGTAATCGCGGGAGTCATCATCCTGC
ACATCTGGGCGCTGCACATCCCCGGGTCGAACAACCCGACGGGCATCGAGGTGAAGGACGAACAGGACACCGTTCCCTTC
CATCCCTATTATACGGCGAAAGACGGCTTCGGCGTCGGCGTCTTCCTGCTCGTCTTTGCGGCGCTGACCTTCTTCACGCC
GAACCTGCTCGGCCACGCCGACAATTATATCCCGGCGAACCCGCTTTCGACGCCCGCGCACATCGTGCCCGAATGGTATT
TCTGGCCCTTCTACGCGATCCTGCGCGCCTTCACCTTCAACTTCCTGTGGATCGACGCGAAGCTTTGGGGCGTTATCGCA
ATGTTCGCGGCGATCGCGTTGCTCTTTTTCCTGCCGTGGCTCGACAGTTCGCCGGTGAAATCGTCGACCTATCGTCCGCT
CTATCGCATCTTCTTCTGGGTGCTGGTGGCCGACGTCGTCCTGCTCGCCATCTGTGGCAAGATGCCCGCCGAACAGCCGT
GGGTCATCCTCAGCCAGATCGGTTCCATCTATTATTTCGCGCACTTCCTGATCATTCTGCCGATCGTGTCGCGCATCGAG
CGACCCTTGCCGATGCCGAAATCGATCACGGAAGCGGTCCTTGCAAAGCATGCCGACGACAAGTCGGCGGCCACGGCCTG
A

Upstream 100 bases:

>100_bases
GCGCGCATCCGCAAAGGGCCGGCGCCCACCAACCTGGTCGTGCCGCCTTATGAATTCACCAGCGACACCGTCGTGACGAT
CGGCTGAGGAGCGAGATAAG

Downstream 100 bases:

>100_bases
GCGCCGGACATTTATAGGAGCTGATACAGCCATGGTTCGTCCGCTCGGTTTTCTCGTCGGCCTGGGTTTCATCACGGCGC
TCGTCTTTGCGATCTTCACC

Product: cytochrome b/b6-like protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MSFPWAKQYEPQQPLMKWLDEKLPLPRLVYNAIGAGYPVPRNLNYFWNFGVLAGAALVIQIVTGIVLAMHYAANAGVAFN
SVEHIMRDVNAGWFIRYAHMNGASMFFIVVYLHIFRGLYYGSYKAPREMVWLLGVVIFLLMMATAFMGYVLPWGQMSFWG
AQVITGFFSAIPMVGEPIRQWLLGGFAPDNAALNRFFSLHYLLPFVIAGVIILHIWALHIPGSNNPTGIEVKDEQDTVPF
HPYYTAKDGFGVGVFLLVFAALTFFTPNLLGHADNYIPANPLSTPAHIVPEWYFWPFYAILRAFTFNFLWIDAKLWGVIA
MFAAIALLFFLPWLDSSPVKSSTYRPLYRIFFWVLVADVVLLAICGKMPAEQPWVILSQIGSIYYFAHFLIILPIVSRIE
RPLPMPKSITEAVLAKHADDKSAATA

Sequences:

>Translated_426_residues
MSFPWAKQYEPQQPLMKWLDEKLPLPRLVYNAIGAGYPVPRNLNYFWNFGVLAGAALVIQIVTGIVLAMHYAANAGVAFN
SVEHIMRDVNAGWFIRYAHMNGASMFFIVVYLHIFRGLYYGSYKAPREMVWLLGVVIFLLMMATAFMGYVLPWGQMSFWG
AQVITGFFSAIPMVGEPIRQWLLGGFAPDNAALNRFFSLHYLLPFVIAGVIILHIWALHIPGSNNPTGIEVKDEQDTVPF
HPYYTAKDGFGVGVFLLVFAALTFFTPNLLGHADNYIPANPLSTPAHIVPEWYFWPFYAILRAFTFNFLWIDAKLWGVIA
MFAAIALLFFLPWLDSSPVKSSTYRPLYRIFFWVLVADVVLLAICGKMPAEQPWVILSQIGSIYYFAHFLIILPIVSRIE
RPLPMPKSITEAVLAKHADDKSAATA
>Mature_425_residues
SFPWAKQYEPQQPLMKWLDEKLPLPRLVYNAIGAGYPVPRNLNYFWNFGVLAGAALVIQIVTGIVLAMHYAANAGVAFNS
VEHIMRDVNAGWFIRYAHMNGASMFFIVVYLHIFRGLYYGSYKAPREMVWLLGVVIFLLMMATAFMGYVLPWGQMSFWGA
QVITGFFSAIPMVGEPIRQWLLGGFAPDNAALNRFFSLHYLLPFVIAGVIILHIWALHIPGSNNPTGIEVKDEQDTVPFH
PYYTAKDGFGVGVFLLVFAALTFFTPNLLGHADNYIPANPLSTPAHIVPEWYFWPFYAILRAFTFNFLWIDAKLWGVIAM
FAAIALLFFLPWLDSSPVKSSTYRPLYRIFFWVLVADVVLLAICGKMPAEQPWVILSQIGSIYYFAHFLIILPIVSRIER
PLPMPKSITEAVLAKHADDKSAATA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=388, Percent_Identity=48.4536082474227, Blast_Score=343, Evalue=2e-94,
Organism=Saccharomyces cerevisiae, GI6226529, Length=366, Percent_Identity=53.8251366120219, Blast_Score=370, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6226532, Length=235, Percent_Identity=54.8936170212766, Blast_Score=259, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6226531, Length=153, Percent_Identity=58.8235294117647, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6226530, Length=127, Percent_Identity=58.2677165354331, Blast_Score=150, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 48120; Mature: 47989

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
SFPWAKQYEPQQPLMKWLDEKLPLPRLVYNAIGAGYPVPRNLNYFWNFGVLAGAALVIQ
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHH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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2560136 [H]