The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103486827

Identifier: 103486827

GI number: 103486827

Start: 1402346

End: 1402705

Strand: Reverse

Name: 103486827

Synonym: Sala_1341

Alternate gene names: NA

Gene position: 1402705-1402346 (Counterclockwise)

Preceding gene: 103486828

Following gene: 103486825

Centisome position: 41.93

GC content: 57.5

Gene sequence:

>360_bases
TTGCCTTCAACGGCGATTAGAGCGGCGTGCTGGATGAACGTGGATAAGCACGCAACTCTTGGGGCGCTTCTATCCAGCGA
TCCGCCGCGAATGGAAGCATTGGCAGCTGTCGCTGCCCTGAAACTTCCAGACTGCTGGATCAGAGCGGGCTTCGTTCGAG
ACGCTGTATGGGATCATCTACGCGGGCGTGCCCCGACTTTTCCACAAGCAGATGTTGATGTGGTCTGGTTCGCGCCGGAG
ATGGCGAGTGCGAAAGTCGATCGGGATATCGAGCAACGGCTGCATGCCTATGTCCCGCGATACAATTGGTCGGTCAAAAA
TCAGGCGCGGATGCACCACCGCAATCATGATGCGCCCTAG

Upstream 100 bases:

>100_bases
GTCGGGGCCGAGGTTGCGGCGGCGCTCTTCGTTATCGACCTGCCAGATTTGGGTGGGTCTGCGCGCTTGGGTGCGGCGGG
GCTGCGTTGCGAGACGCTGA

Downstream 100 bases:

>100_bases
GCGTCAACGGCGCATGCGATGAGGCACTGGCCCGAGACGGCAACCGCGATAGCCGCCGGAGCCAACACCGCACAACAAAA
AGGCCCGCGCCGAAGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPSTAIRAACWMNVDKHATLGALLSSDPPRMEALAAVAALKLPDCWIRAGFVRDAVWDHLRGRAPTFPQADVDVVWFAPE
MASAKVDRDIEQRLHAYVPRYNWSVKNQARMHHRNHDAP

Sequences:

>Translated_119_residues
MPSTAIRAACWMNVDKHATLGALLSSDPPRMEALAAVAALKLPDCWIRAGFVRDAVWDHLRGRAPTFPQADVDVVWFAPE
MASAKVDRDIEQRLHAYVPRYNWSVKNQARMHHRNHDAP
>Mature_118_residues
PSTAIRAACWMNVDKHATLGALLSSDPPRMEALAAVAALKLPDCWIRAGFVRDAVWDHLRGRAPTFPQADVDVVWFAPEM
ASAKVDRDIEQRLHAYVPRYNWSVKNQARMHHRNHDAP

Specific function: Unknown

COG id: COG3575

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13453; Mature: 13322

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTAIRAACWMNVDKHATLGALLSSDPPRMEALAAVAALKLPDCWIRAGFVRDAVWDHL
CCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RGRAPTFPQADVDVVWFAPEMASAKVDRDIEQRLHAYVPRYNWSVKNQARMHHRNHDAP
CCCCCCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PSTAIRAACWMNVDKHATLGALLSSDPPRMEALAAVAALKLPDCWIRAGFVRDAVWDHL
CCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RGRAPTFPQADVDVVWFAPEMASAKVDRDIEQRLHAYVPRYNWSVKNQARMHHRNHDAP
CCCCCCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA