| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486825
Identifier: 103486825
GI number: 103486825
Start: 1401179
End: 1401436
Strand: Reverse
Name: 103486825
Synonym: Sala_1339
Alternate gene names: NA
Gene position: 1401436-1401179 (Counterclockwise)
Preceding gene: 103486827
Following gene: 103486822
Centisome position: 41.89
GC content: 60.85
Gene sequence:
>258_bases TTGCGAACCCCCAAGGAAAACAAAAACTGTCGCGGCGAACCCCGCGTCGATCATGACCCGCTTTGGCGGGCGGGCAATGA ACGGGCGATGACCCGAGTCGATTTTGCGCCAGACCGAATCGATTGGGCGACGAAATGCCGTCCGGTGCGGGAAAAAAGCA CGATCTTTGACGTTGCGGGGTGCGAAGCGCATGGCTATAGCGACCCGCCTAGGCCAAACCTGCCGTTAGCGCGGCAGACC ATGCGGAGACGTGGGTGA
Upstream 100 bases:
>100_bases GGATCGATTTCGCGCATTTGCGCCGTTGCCGGGGCCGGCATCAGCACGAGGCCGATCGACGCCAATGTCGCCAGGACCAT GCCGGTGAAACTCTTGCGCA
Downstream 100 bases:
>100_bases GTGGCTGAAACCAACGGTTTGCTAAACCGTCGTACTGGTAAATCCGGTACCGAGGGTTCGAATCCCTCCGTCTCCGCCAC CTTCTCTCCGGCGTAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAGCEAHGYSDPPRPNLPLARQT MRRRG
Sequences:
>Translated_85_residues MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAGCEAHGYSDPPRPNLPLARQT MRRRG >Mature_85_residues MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAGCEAHGYSDPPRPNLPLARQT MRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9859; Mature: 9859
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCC CEAHGYSDPPRPNLPLARQTMRRRG CCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCC CEAHGYSDPPRPNLPLARQTMRRRG CCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA