Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103486825

Identifier: 103486825

GI number: 103486825

Start: 1401179

End: 1401436

Strand: Reverse

Name: 103486825

Synonym: Sala_1339

Alternate gene names: NA

Gene position: 1401436-1401179 (Counterclockwise)

Preceding gene: 103486827

Following gene: 103486822

Centisome position: 41.89

GC content: 60.85

Gene sequence:

>258_bases
TTGCGAACCCCCAAGGAAAACAAAAACTGTCGCGGCGAACCCCGCGTCGATCATGACCCGCTTTGGCGGGCGGGCAATGA
ACGGGCGATGACCCGAGTCGATTTTGCGCCAGACCGAATCGATTGGGCGACGAAATGCCGTCCGGTGCGGGAAAAAAGCA
CGATCTTTGACGTTGCGGGGTGCGAAGCGCATGGCTATAGCGACCCGCCTAGGCCAAACCTGCCGTTAGCGCGGCAGACC
ATGCGGAGACGTGGGTGA

Upstream 100 bases:

>100_bases
GGATCGATTTCGCGCATTTGCGCCGTTGCCGGGGCCGGCATCAGCACGAGGCCGATCGACGCCAATGTCGCCAGGACCAT
GCCGGTGAAACTCTTGCGCA

Downstream 100 bases:

>100_bases
GTGGCTGAAACCAACGGTTTGCTAAACCGTCGTACTGGTAAATCCGGTACCGAGGGTTCGAATCCCTCCGTCTCCGCCAC
CTTCTCTCCGGCGTAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAGCEAHGYSDPPRPNLPLARQT
MRRRG

Sequences:

>Translated_85_residues
MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAGCEAHGYSDPPRPNLPLARQT
MRRRG
>Mature_85_residues
MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAGCEAHGYSDPPRPNLPLARQT
MRRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9859; Mature: 9859

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCC
CEAHGYSDPPRPNLPLARQTMRRRG
CCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MRTPKENKNCRGEPRVDHDPLWRAGNERAMTRVDFAPDRIDWATKCRPVREKSTIFDVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCC
CEAHGYSDPPRPNLPLARQTMRRRG
CCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA