| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is fda [H]
Identifier: 103486803
GI number: 103486803
Start: 1374647
End: 1375537
Strand: Reverse
Name: fda [H]
Synonym: Sala_1317
Alternate gene names: 103486803
Gene position: 1375537-1374647 (Counterclockwise)
Preceding gene: 103486804
Following gene: 103486801
Centisome position: 41.12
GC content: 65.21
Gene sequence:
>891_bases ATGACCACCGCCAATGCCGAGATGCTGGACCAGATCAAGTCGGGGCAGGGCTTTATCGCCGCGCTCGACCAGAGCGGCGG GTCTACGCCCAAGGCATTGAAGGGCTATGGCATCGGCGAGGACGCTTTTTCGAACGACGAGGAGATGTTCGCGCTGATCC ACGACATGCGCAGCCGCATCGTCACCGCGCCCTGCTTCAACGGCGAAAAGGTGATCGGCGCGATTCTGTTCGAACGCACG ATGGACGGCCAAGCAGGTGGCAAGCCGGTGCCGTCGCTGCTCTGGGAACGTGGCGTCGTGCCCTTTCTGAAGGTCGACAA GGGGCTCGAAGACGAAGCCGACGGCGTCCAGTTGATGAAAGCCAATCCCGGTCTCGACGATCTGTGCGGGCGCGCGGTTG CAAAGGGCGTGTTCGGCACCAAGATGCGCAGCGTCGTCAATCTGGCCCACCCGGTCGGGATCAAGGCGATCGTCGATCAG CAGTTCGCGGAAGCCGCGCGCATCGCCACGCACGGCCTTGTCCCGATCATCGAGCCCGAAGTGAACATCAAGAGCGCCGA GCGCGATGCGGCCGACCGGCTGCTGCTGAAAGAGCTTCTCGCGGCGCTCGACGGCTGGACCGGCGCGCCGGTGATGCTGA AATTGTCGCTGCCTGCCGAGGCGGGGCTGTTCCAGCCGCTGGTTGATCATCCCAGGGTGCTGCGCGTCGTCGCGCTGTCG GGCGGCTTCACGCGCGGCGAAGCATGCGCCGAACTGGCGAAGAACCCCGGCATCATCGCGAGCTTCAGCCGCGCCCTGCT CGAAGACCTGCGCCACCAGATGAGCGACGACGAGTTCAACGCCTCGCTCGGCACCGCGATCGACGAGATTCACGCGGCCT CCGTGGCCTGA
Upstream 100 bases:
>100_bases CGTGGACGCCCTCAAAGCCTGAGTTTATCGCGCAATTGCATCCCGCGCGGCGGGACGCTATGCGCGCGGCCACATACGTA TGCAATCAGTCGGAGACCTT
Downstream 100 bases:
>100_bases CGTGATGGGAGAGGGGCGGCGAGCGGCGGCTGGCCGCTTGTCGCCACCCTCGCTGACGCTTGCGGCCTATAGCCCGCCAG CGAAGCGGAACGAGAAACGA
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTTANAEMLDQIKSGQGFIAALDQSGGSTPKALKGYGIGEDAFSNDEEMFALIHDMRSRIVTAPCFNGEKVIGAILFERT MDGQAGGKPVPSLLWERGVVPFLKVDKGLEDEADGVQLMKANPGLDDLCGRAVAKGVFGTKMRSVVNLAHPVGIKAIVDQ QFAEAARIATHGLVPIIEPEVNIKSAERDAADRLLLKELLAALDGWTGAPVMLKLSLPAEAGLFQPLVDHPRVLRVVALS GGFTRGEACAELAKNPGIIASFSRALLEDLRHQMSDDEFNASLGTAIDEIHAASVA
Sequences:
>Translated_296_residues MTTANAEMLDQIKSGQGFIAALDQSGGSTPKALKGYGIGEDAFSNDEEMFALIHDMRSRIVTAPCFNGEKVIGAILFERT MDGQAGGKPVPSLLWERGVVPFLKVDKGLEDEADGVQLMKANPGLDDLCGRAVAKGVFGTKMRSVVNLAHPVGIKAIVDQ QFAEAARIATHGLVPIIEPEVNIKSAERDAADRLLLKELLAALDGWTGAPVMLKLSLPAEAGLFQPLVDHPRVLRVVALS GGFTRGEACAELAKNPGIIASFSRALLEDLRHQMSDDEFNASLGTAIDEIHAASVA >Mature_295_residues TTANAEMLDQIKSGQGFIAALDQSGGSTPKALKGYGIGEDAFSNDEEMFALIHDMRSRIVTAPCFNGEKVIGAILFERTM DGQAGGKPVPSLLWERGVVPFLKVDKGLEDEADGVQLMKANPGLDDLCGRAVAKGVFGTKMRSVVNLAHPVGIKAIVDQQ FAEAARIATHGLVPIIEPEVNIKSAERDAADRLLLKELLAALDGWTGAPVMLKLSLPAEAGLFQPLVDHPRVLRVVALSG GFTRGEACAELAKNPGIIASFSRALLEDLRHQMSDDEFNASLGTAIDEIHAASVA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 - InterPro: IPR023014 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 31422; Mature: 31291
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTANAEMLDQIKSGQGFIAALDQSGGSTPKALKGYGIGEDAFSNDEEMFALIHDMRSRI CCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCHHCCCHHHHHHHHHHHHHHE VTAPCFNGEKVIGAILFERTMDGQAGGKPVPSLLWERGVVPFLKVDKGLEDEADGVQLMK EECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEE ANPGLDDLCGRAVAKGVFGTKMRSVVNLAHPVGIKAIVDQQFAEAARIATHGLVPIIEPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCC VNIKSAERDAADRLLLKELLAALDGWTGAPVMLKLSLPAEAGLFQPLVDHPRVLRVVALS CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEEEEC GGFTRGEACAELAKNPGIIASFSRALLEDLRHQMSDDEFNASLGTAIDEIHAASVA CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCCC >Mature Secondary Structure TTANAEMLDQIKSGQGFIAALDQSGGSTPKALKGYGIGEDAFSNDEEMFALIHDMRSRI CCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCHHCCCHHHHHHHHHHHHHHE VTAPCFNGEKVIGAILFERTMDGQAGGKPVPSLLWERGVVPFLKVDKGLEDEADGVQLMK EECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEE ANPGLDDLCGRAVAKGVFGTKMRSVVNLAHPVGIKAIVDQQFAEAARIATHGLVPIIEPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCC VNIKSAERDAADRLLLKELLAALDGWTGAPVMLKLSLPAEAGLFQPLVDHPRVLRVVALS CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEEEEC GGFTRGEACAELAKNPGIIASFSRALLEDLRHQMSDDEFNASLGTAIDEIHAASVA CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226699 [H]