Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yqjC [H]

Identifier: 103486707

GI number: 103486707

Start: 1262976

End: 1263416

Strand: Direct

Name: yqjC [H]

Synonym: Sala_1220

Alternate gene names: 103486707

Gene position: 1262976-1263416 (Clockwise)

Preceding gene: 103486706

Following gene: 103486708

Centisome position: 37.76

GC content: 60.32

Gene sequence:

>441_bases
GTGAAACTAGGCCGTCTCAACCATATTGGCATTGCGACGCCGTCGATTGCCGACAGCATCGTCTTTTATCGCGACGTGAT
GGGCGCGACGAAGATACACGAGCCATTTGACCTGCCCGAGCAGGGGGTGAAGGTGTGTTTTGTCGATACGCCGGGTACCG
ATGGGGCGCTGAACGGGACGCAGATCGAGCTGATAGAGCCGTTGCCCGGCAACGCCTCGATCGCGGGGTTTCTGGAGAAG
AATCCGGCGGGGGGGCAGCATCATGTTTGTTACGAAGTGCCCGACATTCATGCTGCGAAGGCCGAGTTCGAGGCGATGGG
TAAGCGGGTGCTCGGCGAGCCGCGGATCGGGGCGCATGGGACGCTGATTTTCTTTCTGCACCCCAAGGATATGGGCGGGG
TGTTGACCGAGATTATGGAGACGCCGAAGGGGGCGCACTGA

Upstream 100 bases:

>100_bases
ATAATCCCCATTCTAAACAGCCGACACAGGACGAGTTCGAGATCGGTCATCCCTGTCTCGCTGGCCCCGTCAAGATAGAA
CTTGGTTCGGAGAATGTGAC

Downstream 100 bases:

>100_bases
TTGCTCCTCCCCCCTTGCGGGGGAGGAAAGTGGAGGTTGGGGACTTGTCCCCTACCGGAACTTGGAGAGGGGTTGGTTGG
CGAGCCTGCGGCTCGCGACC

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKLGRLNHIGIATPSIADSIVFYRDVMGATKIHEPFDLPEQGVKVCFVDTPGTDGALNGTQIELIEPLPGNASIAGFLEK
NPAGGQHHVCYEVPDIHAAKAEFEAMGKRVLGEPRIGAHGTLIFFLHPKDMGGVLTEIMETPKGAH

Sequences:

>Translated_146_residues
MKLGRLNHIGIATPSIADSIVFYRDVMGATKIHEPFDLPEQGVKVCFVDTPGTDGALNGTQIELIEPLPGNASIAGFLEK
NPAGGQHHVCYEVPDIHAAKAEFEAMGKRVLGEPRIGAHGTLIFFLHPKDMGGVLTEIMETPKGAH
>Mature_146_residues
MKLGRLNHIGIATPSIADSIVFYRDVMGATKIHEPFDLPEQGVKVCFVDTPGTDGALNGTQIELIEPLPGNASIAGFLEK
NPAGGQHHVCYEVPDIHAAKAEFEAMGKRVLGEPRIGAHGTLIFFLHPKDMGGVLTEIMETPKGAH

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=139, Percent_Identity=46.7625899280576, Blast_Score=124, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17506387, Length=137, Percent_Identity=47.4452554744526, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15635; Mature: 15635

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGRLNHIGIATPSIADSIVFYRDVMGATKIHEPFDLPEQGVKVCFVDTPGTDGALNGT
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
QIELIEPLPGNASIAGFLEKNPAGGQHHVCYEVPDIHAAKAEFEAMGKRVLGEPRIGAHG
EEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCE
TLIFFLHPKDMGGVLTEIMETPKGAH
EEEEEECCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLGRLNHIGIATPSIADSIVFYRDVMGATKIHEPFDLPEQGVKVCFVDTPGTDGALNGT
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
QIELIEPLPGNASIAGFLEKNPAGGQHHVCYEVPDIHAAKAEFEAMGKRVLGEPRIGAHG
EEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCE
TLIFFLHPKDMGGVLTEIMETPKGAH
EEEEEECCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]