| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486706
Identifier: 103486706
GI number: 103486706
Start: 1262473
End: 1262979
Strand: Direct
Name: 103486706
Synonym: Sala_1219
Alternate gene names: NA
Gene position: 1262473-1262979 (Clockwise)
Preceding gene: 103486704
Following gene: 103486707
Centisome position: 37.74
GC content: 52.07
Gene sequence:
>507_bases ATGCGATGGATATTCTCTGGCAAGCTTACAAAGCGGACGCTCGCAAGCCCTGCGAACGAAACCTGCTATCGTTTCGCGGC AAGCGTGGTGTTGCCTGCCGACGTTTCCGGCAGTCTCAGGAGTCTGCTCCAAAACGCGGAATCGTCAGTTGAGTTTATGC CAGTTTCCCATGTTGCATTTCTCATCAAAAATTGGGGTGAAAGCCATGCGAGCATTGGATCGTCGTTCGATCCTAATAAG CCAATTGCGTGGCTGCATTACGATGACCCACGCAAGAGCCTAAGCCTCGTTTGCGGCTTTCCGGAAAACCAGATGGCGGA TTTCCGAAATCTTTTGGACGAAGCGTTCTTCCGTGGTTTCCTTGTCTCGGCGTCTGTTTTGGGGAGTTTTTCCGCCGTCG CTAATAATCCCCATTCTAAACAGCCGACACAGGACGAGTTCGAGATCGGTCATCCCTGTCTCGCTGGCCCCGTCAAGATA GAACTTGGTTCGGAGAATGTGACGTGA
Upstream 100 bases:
>100_bases ACGCGGCGGCGGATTGCGCTGGGGTTACGGAAGCTGCGGAACAAGCAGTTGGAGAACCCGTGGAAGAAGCACGATAATAT TCCGCTGTGAGGTGTAGATC
Downstream 100 bases:
>100_bases AACTAGGCCGTCTCAACCATATTGGCATTGCGACGCCGTCGATTGCCGACAGCATCGTCTTTTATCGCGACGTGATGGGC GCGACGAAGATACACGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAFLIKNWGESHASIGSSFDPNK PIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGFLVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKI ELGSENVT
Sequences:
>Translated_168_residues MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAFLIKNWGESHASIGSSFDPNK PIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGFLVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKI ELGSENVT >Mature_168_residues MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAFLIKNWGESHASIGSSFDPNK PIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGFLVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKI ELGSENVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18403; Mature: 18403
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAF CCEEECCCCHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCEEECCHHHHHH LIKNWGESHASIGSSFDPNKPIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGF HHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH LVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKIELGSENVT HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAF CCEEECCCCHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCEEECCHHHHHH LIKNWGESHASIGSSFDPNKPIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGF HHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH LVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKIELGSENVT HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA