Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486706

Identifier: 103486706

GI number: 103486706

Start: 1262473

End: 1262979

Strand: Direct

Name: 103486706

Synonym: Sala_1219

Alternate gene names: NA

Gene position: 1262473-1262979 (Clockwise)

Preceding gene: 103486704

Following gene: 103486707

Centisome position: 37.74

GC content: 52.07

Gene sequence:

>507_bases
ATGCGATGGATATTCTCTGGCAAGCTTACAAAGCGGACGCTCGCAAGCCCTGCGAACGAAACCTGCTATCGTTTCGCGGC
AAGCGTGGTGTTGCCTGCCGACGTTTCCGGCAGTCTCAGGAGTCTGCTCCAAAACGCGGAATCGTCAGTTGAGTTTATGC
CAGTTTCCCATGTTGCATTTCTCATCAAAAATTGGGGTGAAAGCCATGCGAGCATTGGATCGTCGTTCGATCCTAATAAG
CCAATTGCGTGGCTGCATTACGATGACCCACGCAAGAGCCTAAGCCTCGTTTGCGGCTTTCCGGAAAACCAGATGGCGGA
TTTCCGAAATCTTTTGGACGAAGCGTTCTTCCGTGGTTTCCTTGTCTCGGCGTCTGTTTTGGGGAGTTTTTCCGCCGTCG
CTAATAATCCCCATTCTAAACAGCCGACACAGGACGAGTTCGAGATCGGTCATCCCTGTCTCGCTGGCCCCGTCAAGATA
GAACTTGGTTCGGAGAATGTGACGTGA

Upstream 100 bases:

>100_bases
ACGCGGCGGCGGATTGCGCTGGGGTTACGGAAGCTGCGGAACAAGCAGTTGGAGAACCCGTGGAAGAAGCACGATAATAT
TCCGCTGTGAGGTGTAGATC

Downstream 100 bases:

>100_bases
AACTAGGCCGTCTCAACCATATTGGCATTGCGACGCCGTCGATTGCCGACAGCATCGTCTTTTATCGCGACGTGATGGGC
GCGACGAAGATACACGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAFLIKNWGESHASIGSSFDPNK
PIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGFLVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKI
ELGSENVT

Sequences:

>Translated_168_residues
MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAFLIKNWGESHASIGSSFDPNK
PIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGFLVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKI
ELGSENVT
>Mature_168_residues
MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAFLIKNWGESHASIGSSFDPNK
PIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGFLVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKI
ELGSENVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18403; Mature: 18403

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAF
CCEEECCCCHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCEEECCHHHHHH
LIKNWGESHASIGSSFDPNKPIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGF
HHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
LVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKIELGSENVT
HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRWIFSGKLTKRTLASPANETCYRFAASVVLPADVSGSLRSLLQNAESSVEFMPVSHVAF
CCEEECCCCHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCEEECCHHHHHH
LIKNWGESHASIGSSFDPNKPIAWLHYDDPRKSLSLVCGFPENQMADFRNLLDEAFFRGF
HHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
LVSASVLGSFSAVANNPHSKQPTQDEFEIGHPCLAGPVKIELGSENVT
HHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA