| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is pgi
Identifier: 103486703
GI number: 103486703
Start: 1256425
End: 1257930
Strand: Direct
Name: pgi
Synonym: Sala_1215
Alternate gene names: 103486703
Gene position: 1256425-1257930 (Clockwise)
Preceding gene: 103486699
Following gene: 103486704
Centisome position: 37.56
GC content: 66.2
Gene sequence:
>1506_bases ATGACGATTGCCTCCGACGCCTGGCAGGCCCTTGCCGACTGGCAACCGCAAAAGCTCACCGATCTGGTCGCCGCCGATCC CGATGCGCGCTTGCAGGCGCTGGTGCGCAATGTCGCCGACATCCGCTTCGACTTTGCCAAGACGCACCTCGACGCCGCCG CGATCGCCATTCTGGCGAACCTTGCCGAAGCGCAGGATTTCGGCGGGCGGCGCAAGACGCTGTTTTCGGGCGGTATCGCC AATCCCACGGAGAATCGCGCCGCCGAGCACAGCGCCGAGCGCGGCGATGGAGCACCCGAATCGGTCCATGCTGCGCAGGC CCTGCACCAAAGAATGCGGATGATGATCGACGCGATCGAAGCGGGGGCGTTCGGCGAGATCCGCCACCTGCTGCACATCG GCATCGGCGGATCGGCGCTTGGTCCCGATTTGCTCGTCGATGCGCTTGGCCGCCACAGCGACCGCTATGACGTCGCGGTC GTCTCGAACGTCGATGGCGCCGCACTTGACGAAGCCTTTGCAAAGTTCAGTCCCGAACATACGCTCGTCGCCGTTGCGTC CAAGACCTTCACGACGACCGAAACCTTGCTGAACGCCAATTCGGCGCTGCAATGGCTTGACGAAGCGGGGGTCGCCGACC CCGTCGGCCGCTTCATCGCGCTGACCGCCAATCCGGGCCGTGCGATGGAATGGGGGATCGACGAAACGCGCATCCTGCCG TTCAGCGAGACGGTCGGCGGGCGCTATTCGCTCTGGTCGTCGATCGGCTTCCCCGCGGCGCTCGCGCTCGGCTGGGACGC CTTCGCCGACCTGCTCGAAGGCGCGGCGGAGATGGACCGCCACTTCCGCCTTGCCGACGGCGCCGACAATATCTGCCTGC TCGCCGCCTTTGCCGACCAGGTCTATGCAAACCGTCTCGGCTGTCAGACGCGCGCGGTCTTCGCCTATGACGAGCGGCTG CGCCTGCTTCCCGCCTATCTGCAACAGCTCGAGATGGAATCGAACGGCAAGTCGGTGACGCTGGACGGCGCGCCGCTCGC GCAGCATAGCGCCCCGGTCACCTGGGGTGGCGTCGGCACCGATGCGCAGCACGCGGTGTTCCAGCTGCTCCATCAGGGCA CGCACCTGGTGCCGGTCGAGTTCATTGTCGCGCGCGAGCCCGATCATCTGCTCGACGACGCGCATCACGAAACACTCGTT GCCAATTGCATTGCGCAGGGTGCGGCGCTGATGGCGGGGCGCGCGAGCGACGATCGCGCGCGCGCATATCCCGGCGACCG GCCCTCGACGACGATTTTGCTCGATCAGGTGAGCCCGCGCAGCCTCGGCGCGCTGATCGCCTTTTACGAGCATCGCGTCT TTGCCAATGCGGTGCTGCTCGGCGTCAATCCGTTCGACCAGTTCGGCGTCGAGCTGGGCAAGGAGATGGCGAAGGGGCTT GCCGAAGGGACGGTCGACTTCGATCCAGCGACGCAGGCGCTGATGAAGGCGGCGCTCGGCGATTAG
Upstream 100 bases:
>100_bases CCGTTCGCATCGGGCGAAGTCGAGGTGGCCATCGCCGTGGTGCCACGCTTCGGGGTGTCTCGACTTCGCTCGACACGAAC GGAAAACCAAGGAAGATTCA
Downstream 100 bases:
>100_bases GCTGAACGCAGAAATCGATTGGCATCGCGGCCGCGCGTAACCACATAGGCGCGGGCTGCGAACTGCGGCCTGTCCATAGC AGGGGTTCTCCATGTCCGAT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MTIASDAWQALADWQPQKLTDLVAADPDARLQALVRNVADIRFDFAKTHLDAAAIAILANLAEAQDFGGRRKTLFSGGIA NPTENRAAEHSAERGDGAPESVHAAQALHQRMRMMIDAIEAGAFGEIRHLLHIGIGGSALGPDLLVDALGRHSDRYDVAV VSNVDGAALDEAFAKFSPEHTLVAVASKTFTTTETLLNANSALQWLDEAGVADPVGRFIALTANPGRAMEWGIDETRILP FSETVGGRYSLWSSIGFPAALALGWDAFADLLEGAAEMDRHFRLADGADNICLLAAFADQVYANRLGCQTRAVFAYDERL RLLPAYLQQLEMESNGKSVTLDGAPLAQHSAPVTWGGVGTDAQHAVFQLLHQGTHLVPVEFIVAREPDHLLDDAHHETLV ANCIAQGAALMAGRASDDRARAYPGDRPSTTILLDQVSPRSLGALIAFYEHRVFANAVLLGVNPFDQFGVELGKEMAKGL AEGTVDFDPATQALMKAALGD
Sequences:
>Translated_501_residues MTIASDAWQALADWQPQKLTDLVAADPDARLQALVRNVADIRFDFAKTHLDAAAIAILANLAEAQDFGGRRKTLFSGGIA NPTENRAAEHSAERGDGAPESVHAAQALHQRMRMMIDAIEAGAFGEIRHLLHIGIGGSALGPDLLVDALGRHSDRYDVAV VSNVDGAALDEAFAKFSPEHTLVAVASKTFTTTETLLNANSALQWLDEAGVADPVGRFIALTANPGRAMEWGIDETRILP FSETVGGRYSLWSSIGFPAALALGWDAFADLLEGAAEMDRHFRLADGADNICLLAAFADQVYANRLGCQTRAVFAYDERL RLLPAYLQQLEMESNGKSVTLDGAPLAQHSAPVTWGGVGTDAQHAVFQLLHQGTHLVPVEFIVAREPDHLLDDAHHETLV ANCIAQGAALMAGRASDDRARAYPGDRPSTTILLDQVSPRSLGALIAFYEHRVFANAVLLGVNPFDQFGVELGKEMAKGL AEGTVDFDPATQALMKAALGD >Mature_500_residues TIASDAWQALADWQPQKLTDLVAADPDARLQALVRNVADIRFDFAKTHLDAAAIAILANLAEAQDFGGRRKTLFSGGIAN PTENRAAEHSAERGDGAPESVHAAQALHQRMRMMIDAIEAGAFGEIRHLLHIGIGGSALGPDLLVDALGRHSDRYDVAVV SNVDGAALDEAFAKFSPEHTLVAVASKTFTTTETLLNANSALQWLDEAGVADPVGRFIALTANPGRAMEWGIDETRILPF SETVGGRYSLWSSIGFPAALALGWDAFADLLEGAAEMDRHFRLADGADNICLLAAFADQVYANRLGCQTRAVFAYDERLR LLPAYLQQLEMESNGKSVTLDGAPLAQHSAPVTWGGVGTDAQHAVFQLLHQGTHLVPVEFIVAREPDHLLDDAHHETLVA NCIAQGAALMAGRASDDRARAYPGDRPSTTILLDQVSPRSLGALIAFYEHRVFANAVLLGVNPFDQFGVELGKEMAKGLA EGTVDFDPATQALMKAALGD
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=484, Percent_Identity=36.7768595041322, Blast_Score=314, Evalue=2e-85, Organism=Homo sapiens, GI296080693, Length=472, Percent_Identity=35.5932203389831, Blast_Score=295, Evalue=6e-80, Organism=Escherichia coli, GI1790457, Length=513, Percent_Identity=38.7914230019493, Blast_Score=327, Evalue=1e-90, Organism=Caenorhabditis elegans, GI71996708, Length=505, Percent_Identity=37.4257425742574, Blast_Score=316, Evalue=2e-86, Organism=Caenorhabditis elegans, GI71996703, Length=505, Percent_Identity=37.4257425742574, Blast_Score=316, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6319673, Length=471, Percent_Identity=38.4288747346072, Blast_Score=315, Evalue=1e-86, Organism=Drosophila melanogaster, GI24651916, Length=517, Percent_Identity=36.5570599613153, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24651914, Length=517, Percent_Identity=36.5570599613153, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI17737445, Length=517, Percent_Identity=36.5570599613153, Blast_Score=326, Evalue=2e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_SPHAL (Q1GTU1)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616264.1 - ProteinModelPortal: Q1GTU1 - SMR: Q1GTU1 - GeneID: 4080439 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1215 - NMPDR: fig|317655.9.peg.1149 - HOGENOM: HBG352954 - OMA: RTSITSA - ProtClustDB: PRK00179 - BioCyc: SALA317655:SALA_1215-MONOMER - BRENDA: 5.3.1.9 - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 53611; Mature: 53480
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 333-333 ACT_SITE 364-364 ACT_SITE 474-474
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIASDAWQALADWQPQKLTDLVAADPDARLQALVRNVADIRFDFAKTHLDAAAIAILAN CCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEAQDFGGRRKTLFSGGIANPTENRAAEHSAERGDGAPESVHAAQALHQRMRMMIDAIE HHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AGAFGEIRHLLHIGIGGSALGPDLLVDALGRHSDRYDVAVVSNVDGAALDEAFAKFSPEH CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCC TLVAVASKTFTTTETLLNANSALQWLDEAGVADPVGRFIALTANPGRAMEWGIDETRILP EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCEEEC FSETVGGRYSLWSSIGFPAALALGWDAFADLLEGAAEMDRHFRLADGADNICLLAAFADQ CHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEEEHHHHHHH VYANRLGCQTRAVFAYDERLRLLPAYLQQLEMESNGKSVTLDGAPLAQHSAPVTWGGVGT HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCCCC DAQHAVFQLLHQGTHLVPVEFIVAREPDHLLDDAHHETLVANCIAQGAALMAGRASDDRA CHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RAYPGDRPSTTILLDQVSPRSLGALIAFYEHRVFANAVLLGVNPFDQFGVELGKEMAKGL CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH AEGTVDFDPATQALMKAALGD HCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TIASDAWQALADWQPQKLTDLVAADPDARLQALVRNVADIRFDFAKTHLDAAAIAILAN CCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEAQDFGGRRKTLFSGGIANPTENRAAEHSAERGDGAPESVHAAQALHQRMRMMIDAIE HHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AGAFGEIRHLLHIGIGGSALGPDLLVDALGRHSDRYDVAVVSNVDGAALDEAFAKFSPEH CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCC TLVAVASKTFTTTETLLNANSALQWLDEAGVADPVGRFIALTANPGRAMEWGIDETRILP EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCEEEC FSETVGGRYSLWSSIGFPAALALGWDAFADLLEGAAEMDRHFRLADGADNICLLAAFADQ CHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEEEHHHHHHH VYANRLGCQTRAVFAYDERLRLLPAYLQQLEMESNGKSVTLDGAPLAQHSAPVTWGGVGT HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCCCC DAQHAVFQLLHQGTHLVPVEFIVAREPDHLLDDAHHETLVANCIAQGAALMAGRASDDRA CHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RAYPGDRPSTTILLDQVSPRSLGALIAFYEHRVFANAVLLGVNPFDQFGVELGKEMAKGL CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHH AEGTVDFDPATQALMKAALGD HCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA