| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is gor [H]
Identifier: 103486704
GI number: 103486704
Start: 1258022
End: 1259368
Strand: Direct
Name: gor [H]
Synonym: Sala_1216
Alternate gene names: 103486704
Gene position: 1258022-1259368 (Clockwise)
Preceding gene: 103486703
Following gene: 103486706
Centisome position: 37.61
GC content: 64.29
Gene sequence:
>1347_bases ATGTCCGATTTCGACTTCGACCTGTTTGTCATCGGCGCCGGTTCGGGCGGCGTGCGCGCATCGCGCATCGCGGCGTCGCA CGGCGCGCGCGTCGCGGTGGCGGAGGAGCACCGGGTCGGCGGGACCTGCGTCATCCGCGGCTGCGTACCGAAGAAGCTGC TCGTCTATGGCGCGCATTTCGCCGAGGATCTGAAAGACGCGCGCAAGTTCGGCTGGGAGGTGCCCGACTGCCGCTTCGAC TGGGACGTGCTACGCGACAATGTGCTCGCCGAGGTCGACCGGCTCGAAGGCCTTTATGGGCAGACGCTCGATAACCACAA GGTCAGGGTCTTCAAGACCCGCGCCACCGTCGTCGCGCCGCAAACGGTGCGCCTTGCCGACGGGCAGGAGCTGACCGCCG AGCGCATCCTGATCGCGACTGGCGGATGGCCGCATGTGCCGGATTTTCCGGGCAGCGAACACGCGATCACCTCGAATGAG GTTTTTCACCTCGAAACGCTGCCGAGGCGCGTCGTGATCGCGGGCGGAGGCTATATCGCCAATGAGTTCGCGGGCATTTT CAACGAATTCGGCAGCAAGGTCACGATCGTCAACCGCGGCGACACGATCCTGCGCGGCTATGACGAGCAGATCCGCGACC GGCTGCTCCAGATTTCGATGACCAAGGGCATCGATTTCAAGTTCAACGCGCCGTTCGAGAAGATCGAGAAAAACGACGAC GGAACGTTGACGATCTATCTCGGCGGTTGCGAACCGATCGTTGCCGACGCGGTGCTGGTCGCGACCGGGCGCGTGCCCAA CACCAAGGGGCTGGGTCTCGATGAGGTCGGAGTCGATCTCGACCCAACGGGTGCGATCAGGGTCGATGAGCACAACCAGT CGTCGGTGCCCAGCATCTATGGGGTCGGCGACGTCACCAACCGCATCCAGCTGACTCCGGTGGCGATCCGCGAGGGGCAG GCGTTTGCCGACTCGGTGTTCGGCGGCCATCCGACGGTGGTGGATTATGCCAATGTCCCGAGCGCGGTGTTCAGCCACCC GCCGATCGGCGCGGTCGGGATGACCGAGGCGGAGGCGCGCAACAAGCTTGGTTCGGTCCGCGTCTACACCAGCGATTTTC GCGCGATGAAAAATGTCCTCGCGGGACGCAACGAGCGCGCGCTCTACAAGATGATCGTCAATGCCGCGACCGACCAGGTC GTCGGGCTGCACATGATCGGCCCGGACGCGCCGGAGATACTTCAGGCGGCGGCCATCGCGGTGAAGGCGGGGCTGACCAA GGCCGATTTCGACGCGACGGTCGCGCTGCATCCGAGCATGGCCGAAGAGCTGGTGTTGTTGAAATAG
Upstream 100 bases:
>100_bases GGCGATTAGGCTGAACGCAGAAATCGATTGGCATCGCGGCCGCGCGTAACCACATAGGCGCGGGCTGCGAACTGCGGCCT GTCCATAGCAGGGGTTCTCC
Downstream 100 bases:
>100_bases TGTTACAACGTCGCCCCCGCGCAGGCGGGGGCGACGCCAATCGTCATCCAATCCGGTACGGCACCACATCGCGCCGATCG GGATCGACCAAAATCGGCCG
Product: glutathione reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSDFDFDLFVIGAGSGGVRASRIAASHGARVAVAEEHRVGGTCVIRGCVPKKLLVYGAHFAEDLKDARKFGWEVPDCRFD WDVLRDNVLAEVDRLEGLYGQTLDNHKVRVFKTRATVVAPQTVRLADGQELTAERILIATGGWPHVPDFPGSEHAITSNE VFHLETLPRRVVIAGGGYIANEFAGIFNEFGSKVTIVNRGDTILRGYDEQIRDRLLQISMTKGIDFKFNAPFEKIEKNDD GTLTIYLGGCEPIVADAVLVATGRVPNTKGLGLDEVGVDLDPTGAIRVDEHNQSSVPSIYGVGDVTNRIQLTPVAIREGQ AFADSVFGGHPTVVDYANVPSAVFSHPPIGAVGMTEAEARNKLGSVRVYTSDFRAMKNVLAGRNERALYKMIVNAATDQV VGLHMIGPDAPEILQAAAIAVKAGLTKADFDATVALHPSMAEELVLLK
Sequences:
>Translated_448_residues MSDFDFDLFVIGAGSGGVRASRIAASHGARVAVAEEHRVGGTCVIRGCVPKKLLVYGAHFAEDLKDARKFGWEVPDCRFD WDVLRDNVLAEVDRLEGLYGQTLDNHKVRVFKTRATVVAPQTVRLADGQELTAERILIATGGWPHVPDFPGSEHAITSNE VFHLETLPRRVVIAGGGYIANEFAGIFNEFGSKVTIVNRGDTILRGYDEQIRDRLLQISMTKGIDFKFNAPFEKIEKNDD GTLTIYLGGCEPIVADAVLVATGRVPNTKGLGLDEVGVDLDPTGAIRVDEHNQSSVPSIYGVGDVTNRIQLTPVAIREGQ AFADSVFGGHPTVVDYANVPSAVFSHPPIGAVGMTEAEARNKLGSVRVYTSDFRAMKNVLAGRNERALYKMIVNAATDQV VGLHMIGPDAPEILQAAAIAVKAGLTKADFDATVALHPSMAEELVLLK >Mature_447_residues SDFDFDLFVIGAGSGGVRASRIAASHGARVAVAEEHRVGGTCVIRGCVPKKLLVYGAHFAEDLKDARKFGWEVPDCRFDW DVLRDNVLAEVDRLEGLYGQTLDNHKVRVFKTRATVVAPQTVRLADGQELTAERILIATGGWPHVPDFPGSEHAITSNEV FHLETLPRRVVIAGGGYIANEFAGIFNEFGSKVTIVNRGDTILRGYDEQIRDRLLQISMTKGIDFKFNAPFEKIEKNDDG TLTIYLGGCEPIVADAVLVATGRVPNTKGLGLDEVGVDLDPTGAIRVDEHNQSSVPSIYGVGDVTNRIQLTPVAIREGQA FADSVFGGHPTVVDYANVPSAVFSHPPIGAVGMTEAEARNKLGSVRVYTSDFRAMKNVLAGRNERALYKMIVNAATDQVV GLHMIGPDAPEILQAAAIAVKAGLTKADFDATVALHPSMAEELVLLK
Specific function: Maintains High Levels Of Reduced Glutathione In The Cytosol. [C]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=459, Percent_Identity=40.0871459694989, Blast_Score=314, Evalue=1e-85, Organism=Homo sapiens, GI22035672, Length=471, Percent_Identity=35.8811040339703, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI33519430, Length=475, Percent_Identity=34.3157894736842, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI33519428, Length=475, Percent_Identity=34.3157894736842, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI33519426, Length=475, Percent_Identity=34.3157894736842, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI148277065, Length=475, Percent_Identity=34.3157894736842, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI148277071, Length=475, Percent_Identity=34.3157894736842, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI291045266, Length=430, Percent_Identity=33.7209302325581, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI91199540, Length=456, Percent_Identity=30.4824561403509, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI291045268, Length=428, Percent_Identity=31.0747663551402, Blast_Score=189, Evalue=5e-48, Organism=Escherichia coli, GI1789915, Length=429, Percent_Identity=37.995337995338, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI87081717, Length=445, Percent_Identity=29.8876404494382, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI87082354, Length=455, Percent_Identity=30.5494505494506, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI1786307, Length=459, Percent_Identity=27.8867102396514, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1789065, Length=183, Percent_Identity=30.6010928961749, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71983429, Length=449, Percent_Identity=39.6436525612472, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71983419, Length=449, Percent_Identity=39.6436525612472, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17557007, Length=472, Percent_Identity=33.8983050847458, Blast_Score=254, Evalue=8e-68, Organism=Caenorhabditis elegans, GI71982272, Length=483, Percent_Identity=30.0207039337474, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI32565766, Length=456, Percent_Identity=30.7017543859649, Blast_Score=189, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6325166, Length=461, Percent_Identity=37.3101952277657, Blast_Score=281, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6321091, Length=459, Percent_Identity=28.7581699346405, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6325240, Length=485, Percent_Identity=28.8659793814433, Blast_Score=155, Evalue=1e-38, Organism=Drosophila melanogaster, GI17737741, Length=474, Percent_Identity=33.5443037974684, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24640553, Length=469, Percent_Identity=33.0490405117271, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24640549, Length=469, Percent_Identity=33.0490405117271, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24640551, Length=470, Percent_Identity=32.9787234042553, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI21358499, Length=460, Percent_Identity=30.6521739130435, Blast_Score=192, Evalue=3e-49,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006324 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48313; Mature: 48181
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFDFDLFVIGAGSGGVRASRIAASHGARVAVAEEHRVGGTCVIRGCVPKKLLVYGAHF CCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHEECHHH AEDLKDARKFGWEVPDCRFDWDVLRDNVLAEVDRLEGLYGQTLDNHKVRVFKTRATVVAP HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEEEEEECC QTVRLADGQELTAERILIATGGWPHVPDFPGSEHAITSNEVFHLETLPRRVVIAGGGYIA CEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCEEEEECCCCHH NEFAGIFNEFGSKVTIVNRGDTILRGYDEQIRDRLLQISMTKGIDFKFNAPFEKIEKNDD HHHHHHHHHHCCEEEEEECCCCEECCCCHHHHHHHHEEEECCCCCEEECCCHHHHCCCCC GTLTIYLGGCEPIVADAVLVATGRVPNTKGLGLDEVGVDLDPTGAIRVDEHNQSSVPSIY CEEEEEECCCCHHHHCEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCEE GVGDVTNRIQLTPVAIREGQAFADSVFGGHPTVVDYANVPSAVFSHPPIGAVGMTEAEAR ECCCCCCEEEEEEEEEECCCHHHHHHCCCCCCEEECCCCCHHHHCCCCCCCCCCCHHHHH NKLGSVRVYTSDFRAMKNVLAGRNERALYKMIVNAATDQVVGLHMIGPDAPEILQAAAIA HCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH VKAGLTKADFDATVALHPSMAEELVLLK HHCCCCCCCCCEEEEECCCCCCCEEECC >Mature Secondary Structure SDFDFDLFVIGAGSGGVRASRIAASHGARVAVAEEHRVGGTCVIRGCVPKKLLVYGAHF CCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHEECHHH AEDLKDARKFGWEVPDCRFDWDVLRDNVLAEVDRLEGLYGQTLDNHKVRVFKTRATVVAP HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEEEEEECC QTVRLADGQELTAERILIATGGWPHVPDFPGSEHAITSNEVFHLETLPRRVVIAGGGYIA CEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCEEEEECCCCHH NEFAGIFNEFGSKVTIVNRGDTILRGYDEQIRDRLLQISMTKGIDFKFNAPFEKIEKNDD HHHHHHHHHHCCEEEEEECCCCEECCCCHHHHHHHHEEEECCCCCEEECCCHHHHCCCCC GTLTIYLGGCEPIVADAVLVATGRVPNTKGLGLDEVGVDLDPTGAIRVDEHNQSSVPSIY CEEEEEECCCCHHHHCEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCEE GVGDVTNRIQLTPVAIREGQAFADSVFGGHPTVVDYANVPSAVFSHPPIGAVGMTEAEAR ECCCCCCEEEEEEEEEECCCHHHHHHCCCCCCEEECCCCCHHHHCCCCCCCCCCCHHHHH NKLGSVRVYTSDFRAMKNVLAGRNERALYKMIVNAATDQVVGLHMIGPDAPEILQAAAIA HCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH VKAGLTKADFDATVALHPSMAEELVLLK HHCCCCCCCCCEEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7538273 [H]