Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486655

Identifier: 103486655

GI number: 103486655

Start: 1201255

End: 1202166

Strand: Direct

Name: 103486655

Synonym: Sala_1167

Alternate gene names: NA

Gene position: 1201255-1202166 (Clockwise)

Preceding gene: 103486654

Following gene: 103486656

Centisome position: 35.91

GC content: 72.7

Gene sequence:

>912_bases
ATGAGTGACTCGCTCTCCTTTCCCGGCATCGAACCGCCGTCGCCGACGCTTTCGGCGCGACTGGGCGAGTTGGCGGACTA
TTTCGCGGCGCCGACTGCGGGACGGCTGACCGACGAGCAGCGCGCGCTGTCGCTGGGGATCGCGCGGCGGCTGGTCGCCG
ATGTCGCGGCGCTGATCGATCCCGGGATCGATGCCGCTGCTCTATGGGAGGAATGGCTGCATCACGGGGTCCCCGGCGCG
GCGCGGCTGGTCGGTCCCTGTTTTGCGCGGGCCGAGGAGCATCGCTGGCGCGCGCTATCGACCGAGCGCGCGGTGCCGAC
GCCGGTGGCGGACGGCGCCGATGAGGTCGGCGGCGCGACGCCCGACACGCCGATGACGGCGCGCGAGCGCGCCTATCTGG
ACCTGCGCATCGCCGACCGGCGGCGCTTCGACGCCTATGGGCAGCCGACGCTGGCGATCGCCGATCTCGACGAGGAAATC
TTCCGCGCGCTGCTTCATGACGTCGCAGCGTGGCGGCTGGCCGCGGTGAGCACCGATACCGGCCGTGCGGCAAGTCTTGG
CGATGCCGTGCGGTACGCGGTCGAGCGGCACGCCGACGCACCCGACATGACCGCCGCTGCCATCTCCTATCGCGAGGCTG
TCGGCGCCGCGTTGCCCGAGGCGGCGCGCACCGCGATCGCCGCGCACGACTGGCCTGCGCTGATCGCGCTCGCAGCGGCG
GCGCAGCATCGCCGATACACCGATATGGCGCTGGCGCTCCTGACCGCCGAGATGACGGCGCTGCCCTCGCTGCTCGCGCC
GCTGCGCCTCGACCGTGAAGCGCTGGCCCCGCTCGAAGCGTCGCTGGCAATGCTCACCGCGCGCGCGGTGAGCGACGCCG
ATGGCGTCACGGCGGCGGAGACGGGGCGATGA

Upstream 100 bases:

>100_bases
CTGCTCTGGCTGCACCTCGCGCGGCGTCCGGATGCTCGCTAAATCAGGCTCCTTCAAGGTTTAAGGCCTATTAACGCCAA
GCTGCTATTGGCGGGTGCGC

Downstream 100 bases:

>100_bases
GCGAGCGCGTCGTCCGCGGCCGCGTTGACCGGTCGGGCGTACTGGTGAGCGCCGATGTGCCGCTGTTGCGGCTTCAGCAA
CGCGCGGGGGCGGGGCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSDSLSFPGIEPPSPTLSARLGELADYFAAPTAGRLTDEQRALSLGIARRLVADVAALIDPGIDAAALWEEWLHHGVPGA
ARLVGPCFARAEEHRWRALSTERAVPTPVADGADEVGGATPDTPMTARERAYLDLRIADRRRFDAYGQPTLAIADLDEEI
FRALLHDVAAWRLAAVSTDTGRAASLGDAVRYAVERHADAPDMTAAAISYREAVGAALPEAARTAIAAHDWPALIALAAA
AQHRRYTDMALALLTAEMTALPSLLAPLRLDREALAPLEASLAMLTARAVSDADGVTAAETGR

Sequences:

>Translated_303_residues
MSDSLSFPGIEPPSPTLSARLGELADYFAAPTAGRLTDEQRALSLGIARRLVADVAALIDPGIDAAALWEEWLHHGVPGA
ARLVGPCFARAEEHRWRALSTERAVPTPVADGADEVGGATPDTPMTARERAYLDLRIADRRRFDAYGQPTLAIADLDEEI
FRALLHDVAAWRLAAVSTDTGRAASLGDAVRYAVERHADAPDMTAAAISYREAVGAALPEAARTAIAAHDWPALIALAAA
AQHRRYTDMALALLTAEMTALPSLLAPLRLDREALAPLEASLAMLTARAVSDADGVTAAETGR
>Mature_302_residues
SDSLSFPGIEPPSPTLSARLGELADYFAAPTAGRLTDEQRALSLGIARRLVADVAALIDPGIDAAALWEEWLHHGVPGAA
RLVGPCFARAEEHRWRALSTERAVPTPVADGADEVGGATPDTPMTARERAYLDLRIADRRRFDAYGQPTLAIADLDEEIF
RALLHDVAAWRLAAVSTDTGRAASLGDAVRYAVERHADAPDMTAAAISYREAVGAALPEAARTAIAAHDWPALIALAAAA
QHRRYTDMALALLTAEMTALPSLLAPLRLDREALAPLEASLAMLTARAVSDADGVTAAETGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32080; Mature: 31949

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSLSFPGIEPPSPTLSARLGELADYFAAPTAGRLTDEQRALSLGIARRLVADVAALID
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PGIDAAALWEEWLHHGVPGAARLVGPCFARAEEHRWRALSTERAVPTPVADGADEVGGAT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
PDTPMTARERAYLDLRIADRRRFDAYGQPTLAIADLDEEIFRALLHDVAAWRLAAVSTDT
CCCCCCHHHHHEEEEEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
GRAASLGDAVRYAVERHADAPDMTAAAISYREAVGAALPEAARTAIAAHDWPALIALAAA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
AQHRRYTDMALALLTAEMTALPSLLAPLRLDREALAPLEASLAMLTARAVSDADGVTAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TGR
CCC
>Mature Secondary Structure 
SDSLSFPGIEPPSPTLSARLGELADYFAAPTAGRLTDEQRALSLGIARRLVADVAALID
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PGIDAAALWEEWLHHGVPGAARLVGPCFARAEEHRWRALSTERAVPTPVADGADEVGGAT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
PDTPMTARERAYLDLRIADRRRFDAYGQPTLAIADLDEEIFRALLHDVAAWRLAAVSTDT
CCCCCCHHHHHEEEEEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
GRAASLGDAVRYAVERHADAPDMTAAAISYREAVGAALPEAARTAIAAHDWPALIALAAA
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
AQHRRYTDMALALLTAEMTALPSLLAPLRLDREALAPLEASLAMLTARAVSDADGVTAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA