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The map label for this gene is frc [H]

Identifier: 103486588

GI number: 103486588

Start: 1129237

End: 1130415

Strand: Direct

Name: frc [H]

Synonym: Sala_1099

Alternate gene names: 103486588

Gene position: 1129237-1130415 (Clockwise)

Preceding gene: 103486586

Following gene: 103486589

Centisome position: 33.76

GC content: 67.6

Gene sequence:

>1179_bases
GTGCCGCTGACGGGAATAAGGGTGCTCGATTTTGGCCGCTATATCGCCGGGCCTTATTGTGCGGCGCTGCTCGCCGATTA
TGGGGCCGATGTCATCCGGATCGAGGCGCCCGGCGGCAATGACGACCGCTACACGGTGCCCGTCGCCGACGACGGGTCGG
GTGCGATGTTCATGCAGATGAACCGCGCCAAACGCTGCCTGACGCTGAAGCCGGGCAGTGCGGAGGGGCGCGAGATCGTG
CGCCGTCTGGTCGAAACCGCCGACATCGTCGTCGCCAACCTGCCGCATGATGCGCTGGTCAAGCTGGGGCTCGACTATGA
CAGCCTGTCCGCGATCAATCCGCGCATCATCCTCGCGACCGCCTCAGCCTTCGGCAGCGAGGGGCCGCTCGCGGGCCGCG
TCGGCTTCGACGCGGTGGGGCAGGCGATGTCGGGGACGGTCCACCTCACCGGAACGGCGGACCAGCCCTATCGCGCGCAG
GTCAATTATGTCGATTTCGCCACGGCGCTGCACTGCGCTTTCGGCATCCTGCTCGCGCTGCGCGAGCGTGAGGCGACGGG
CAAAGGGCAATGCATATCGGGATCGCTGCTCGGCACCGCCCTCGCGCTGTCGAACGCCCTCACCATCGATCACGCGCTGA
ACGGCATCGAGCGCCAACCGATCGGCAACCGCAGCTTCAGCTCGGCGCCGACCGACCTGTTTCGCACGCGCGACGGCTGG
ATCGTCACGCAGATCGTCGGCAATGGCATATTCGCGCGCTGGGCGGCGCTCGTCGGGCAACCCGAGCTGGTCGGCGATCC
GCGCTATGCCAGCGACATATTGCGCGGCGACAATGGCGCCGAACTGAGCGCGATCATGCAGCGCTGGTGCATCGAGCGCA
CCAGCACTGACGCCATCGCCGAGCTGGGCGCGGCGCGCGTGCCAGCGGCGCCGGTGTTGCACGCGGGAGAGGTGCTGGCG
CAGCCGCAGGTCGCAGCAATACGACTCGTCGAGCCCGTCGCCTATCCAGGCGCGCCGGGCGACGTGCCCGTCATCCGCGC
ACCGATCCGCCTGTCGGCAAGCGACAAGGTCGTGGCGACGCGCGCGCCGCAGCTTGGCGAGCATAGCGACGCGATCCTCG
CCGAGATCGGCTATGATGTCGACGCGATCGCGGCTTTGCGCGCAGCAAATATAATTTGA

Upstream 100 bases:

>100_bases
CGCGCGAACATGCAAGCCGCCGCTTTCGACGAAGCCACTGGCAGGCTCGACGGGCGGCTGCTAGCCGGATTGAAACAATG
GGAAACGGGAAGGGTATGGC

Downstream 100 bases:

>100_bases
TCGGGCGTGGGTGGACAGCGCAAGCGCGGTCACTTACGTTACCGTTCGGTATAAAAATCAGCCAAGGAGCCTCGCGATGA
CCGACACCAGCGAATATGTG

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPLTGIRVLDFGRYIAGPYCAALLADYGADVIRIEAPGGNDDRYTVPVADDGSGAMFMQMNRAKRCLTLKPGSAEGREIV
RRLVETADIVVANLPHDALVKLGLDYDSLSAINPRIILATASAFGSEGPLAGRVGFDAVGQAMSGTVHLTGTADQPYRAQ
VNYVDFATALHCAFGILLALREREATGKGQCISGSLLGTALALSNALTIDHALNGIERQPIGNRSFSSAPTDLFRTRDGW
IVTQIVGNGIFARWAALVGQPELVGDPRYASDILRGDNGAELSAIMQRWCIERTSTDAIAELGAARVPAAPVLHAGEVLA
QPQVAAIRLVEPVAYPGAPGDVPVIRAPIRLSASDKVVATRAPQLGEHSDAILAEIGYDVDAIAALRAANII

Sequences:

>Translated_392_residues
MPLTGIRVLDFGRYIAGPYCAALLADYGADVIRIEAPGGNDDRYTVPVADDGSGAMFMQMNRAKRCLTLKPGSAEGREIV
RRLVETADIVVANLPHDALVKLGLDYDSLSAINPRIILATASAFGSEGPLAGRVGFDAVGQAMSGTVHLTGTADQPYRAQ
VNYVDFATALHCAFGILLALREREATGKGQCISGSLLGTALALSNALTIDHALNGIERQPIGNRSFSSAPTDLFRTRDGW
IVTQIVGNGIFARWAALVGQPELVGDPRYASDILRGDNGAELSAIMQRWCIERTSTDAIAELGAARVPAAPVLHAGEVLA
QPQVAAIRLVEPVAYPGAPGDVPVIRAPIRLSASDKVVATRAPQLGEHSDAILAEIGYDVDAIAALRAANII
>Mature_391_residues
PLTGIRVLDFGRYIAGPYCAALLADYGADVIRIEAPGGNDDRYTVPVADDGSGAMFMQMNRAKRCLTLKPGSAEGREIVR
RLVETADIVVANLPHDALVKLGLDYDSLSAINPRIILATASAFGSEGPLAGRVGFDAVGQAMSGTVHLTGTADQPYRAQV
NYVDFATALHCAFGILLALREREATGKGQCISGSLLGTALALSNALTIDHALNGIERQPIGNRSFSSAPTDLFRTRDGWI
VTQIVGNGIFARWAALVGQPELVGDPRYASDILRGDNGAELSAIMQRWCIERTSTDAIAELGAARVPAAPVLHAGEVLAQ
PQVAAIRLVEPVAYPGAPGDVPVIRAPIRLSASDKVVATRAPQLGEHSDAILAEIGYDVDAIAALRAANII

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=394, Percent_Identity=31.2182741116751, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI300863124, Length=420, Percent_Identity=29.2857142857143, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI300863126, Length=393, Percent_Identity=28.2442748091603, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI13376042, Length=420, Percent_Identity=26.6666666666667, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI266456254, Length=407, Percent_Identity=28.5012285012285, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI42794625, Length=407, Percent_Identity=28.5012285012285, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI266458393, Length=242, Percent_Identity=33.4710743801653, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI266458397, Length=242, Percent_Identity=33.4710743801653, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI42822893, Length=145, Percent_Identity=33.7931034482759, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI266458395, Length=145, Percent_Identity=33.7931034482759, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI87082093, Length=382, Percent_Identity=30.8900523560209, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1788717, Length=415, Percent_Identity=29.6385542168675, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI1786222, Length=396, Percent_Identity=26.2626262626263, Blast_Score=99, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI32564160, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115535051, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24648431, Length=398, Percent_Identity=32.6633165829146, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24585488, Length=242, Percent_Identity=34.297520661157, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 41252; Mature: 41120

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTGIRVLDFGRYIAGPYCAALLADYGADVIRIEAPGGNDDRYTVPVADDGSGAMFMQM
CCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEE
NRAKRCLTLKPGSAEGREIVRRLVETADIVVANLPHDALVKLGLDYDSLSAINPRIILAT
CCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEECCHHHHEEECCCHHHHCCCCCEEEEEE
ASAFGSEGPLAGRVGFDAVGQAMSGTVHLTGTADQPYRAQVNYVDFATALHCAFGILLAL
ECCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHH
REREATGKGQCISGSLLGTALALSNALTIDHALNGIERQPIGNRSFSSAPTDLFRTRDGW
HHHCCCCCCCEECCHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCE
IVTQIVGNGIFARWAALVGQPELVGDPRYASDILRGDNGAELSAIMQRWCIERTSTDAIA
EEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHH
ELGAARVPAAPVLHAGEVLAQPQVAAIRLVEPVAYPGAPGDVPVIRAPIRLSASDKVVAT
HCCCCCCCCCCCHHCHHHHCCCCHHEEEEECCCCCCCCCCCCCEEECCEEECCCCCEEEE
RAPQLGEHSDAILAEIGYDVDAIAALRAANII
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PLTGIRVLDFGRYIAGPYCAALLADYGADVIRIEAPGGNDDRYTVPVADDGSGAMFMQM
CCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEE
NRAKRCLTLKPGSAEGREIVRRLVETADIVVANLPHDALVKLGLDYDSLSAINPRIILAT
CCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEECCHHHHEEECCCHHHHCCCCCEEEEEE
ASAFGSEGPLAGRVGFDAVGQAMSGTVHLTGTADQPYRAQVNYVDFATALHCAFGILLAL
ECCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHH
REREATGKGQCISGSLLGTALALSNALTIDHALNGIERQPIGNRSFSSAPTDLFRTRDGW
HHHCCCCCCCEECCHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCE
IVTQIVGNGIFARWAALVGQPELVGDPRYASDILRGDNGAELSAIMQRWCIERTSTDAIA
EEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHH
ELGAARVPAAPVLHAGEVLAQPQVAAIRLVEPVAYPGAPGDVPVIRAPIRLSASDKVVAT
HCCCCCCCCCCCHHCHHHHCCCCHHEEEEECCCCCCCCCCCCCEEECCEEECCCCCEEEE
RAPQLGEHSDAILAEIGYDVDAIAALRAANII
CCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]