| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is bglA [H]
Identifier: 103486508
GI number: 103486508
Start: 1052515
End: 1053861
Strand: Reverse
Name: bglA [H]
Synonym: Sala_1019
Alternate gene names: 103486508
Gene position: 1053861-1052515 (Counterclockwise)
Preceding gene: 103486509
Following gene: 103486507
Centisome position: 31.5
GC content: 64.96
Gene sequence:
>1347_bases ATGACGCAGACCATCTTTCCCGACGATTTCCTGTGGGGCGCGGCCACCGCCGCCTATCAGATCGAGGGATCGCCGCTTGC CGATGGAGCGGGGCCGAGCATCTGGCAGCGTTTCAGCCACGATCCGCGGCTGATGGCGGCGAAAGGCGACACCGGCGACA TCGCGTGCGACCATTATAACCGGATGCCCGCCGACGTTGCCCTGATGAAGGAACTGGGACTTCAGGCCTATCGCTTCAGC GTCAACTGGGGCCGCATATTGCCCGAAGGCACCGGGCGCGTGAACGAGCCGGGGCTCGATTTCTATGAACGGCTGGTCGA TGAACTGCTCAGGCATGGCATCGAACCGTTGCTGACGCTCCACCATTGGGATCTGCCCGCCGCGCTCGACGACCGCGGCG GCTGGCTCAACCGCGACAGCGCCGGCTGGTTCGCCGACTATGCCGCGATCATGTATCGCCGCCTCGACGGGCGGGTGAAG AAATGGGTGACACTCAACGAGCCGTGGGTGATCACCGACGGCGGCTACCTCCACGGCGCCCTCGCCCCCGGCCACCGCAA CATGTTCGAGGCGCCGATCGCCAGCCACAATCTGATGCGCGCGCACGGCGCGGCGGTGCAGGCCTATCGCAGCGAAGGGG CGCACGAAATCGGCCTCGTCGTCAATATCGAACCCAAATATCCGGCGAGCGACGGCATCGAGGACGTGGCGGCGGCGGCG CGCGCGCACGCCTATATGAACCGCCAGTATCTCGATCCTGCGCTGAAGGGCAGCTACCCCGCCGAACTCGCCGAAATCTT CGGCGAAGCCTGGCCCCAATGGCCCGCCGAAGACATGCGGTCCATCTGCCAGCCGGTCGATTTCATCGGCATCAATTACT ACACGCGCAACGTCGTGCAGGCCGACCCGAACCAGTGGCCGCTGCGCGCCTCGCCGGTCCGGCAGAACGCCACGCACACG ACGACCGACTGGGAAGTCTGTCCGCCCGCGCTCACCGACATGCTCATCTGGTTCCGTGATACATACGGCAACATTCCCGT CTATATCACCGAAAATGGCGCGGCCTTTTACGACCCGCCGACCGCGGGGCCCGCCGGCATCGACGATCCGCTGCGCTGCG ACTATCTCCGCACGCACATCTCGGCGATCGGCGACGCGATCCGCCAGGGCGTCGACGTGCGCGGCTATATGGCCTGGTCG CTGCTCGACAATCTCGAATGGTCGCTCGGCTATTCGAAGCGCTTCGGCATCGTCCACGTCGATTATGAAACGCAGGTGCG CACGCCGAAACGCAGCGCGCGCTTCTATTCGAGTGTCATCCGGTCAAACGGCGGGAACCTCGGCTGA
Upstream 100 bases:
>100_bases GCCACAATGCCTGGGATCCCGCCTATGACGATCCGGCGCTCTATGCCTGGCTGCTCGAACAGGCGCTCCCCTCCCCGACG AGCACCGACAAGGACAAGAA
Downstream 100 bases:
>100_bases TGCGCTGGCTGGTGCCGTTGCTCGCCCTCGCGCTCGCGCTCCCCGCCGCGGCGAAGGAACGCGCCGACCGGTTCAGCGCG ATGACCTATAACATCCGCCT
Product: Beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYNRMPADVALMKELGLQAYRFS VNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTLHHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVK KWVTLNEPWVITDGGYLHGALAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQADPNQWPLRASPVRQNATHT TTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPPTAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWS LLDNLEWSLGYSKRFGIVHVDYETQVRTPKRSARFYSSVIRSNGGNLG
Sequences:
>Translated_448_residues MTQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYNRMPADVALMKELGLQAYRFS VNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTLHHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVK KWVTLNEPWVITDGGYLHGALAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQADPNQWPLRASPVRQNATHT TTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPPTAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWS LLDNLEWSLGYSKRFGIVHVDYETQVRTPKRSARFYSSVIRSNGGNLG >Mature_447_residues TQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYNRMPADVALMKELGLQAYRFSV NWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTLHHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVKK WVTLNEPWVITDGGYLHGALAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAAR AHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQADPNQWPLRASPVRQNATHTT TDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPPTAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWSL LDNLEWSLGYSKRFGIVHVDYETQVRTPKRSARFYSSVIRSNGGNLG
Specific function: Can Hydrolyze Salicin, Cellobiose, And Probably Arbutin. [C]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=472, Percent_Identity=38.771186440678, Blast_Score=299, Evalue=3e-81, Organism=Homo sapiens, GI13273313, Length=469, Percent_Identity=36.2473347547974, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI110681710, Length=475, Percent_Identity=32.6315789473684, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI24497614, Length=479, Percent_Identity=33.6116910229645, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI28376633, Length=458, Percent_Identity=31.2227074235808, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI190360571, Length=97, Percent_Identity=46.3917525773196, Blast_Score=95, Evalue=2e-19, Organism=Escherichia coli, GI1789070, Length=476, Percent_Identity=31.5126050420168, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI2367174, Length=485, Percent_Identity=30.5154639175258, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI2367270, Length=469, Percent_Identity=31.7697228144989, Blast_Score=194, Evalue=9e-51, Organism=Caenorhabditis elegans, GI17539390, Length=474, Percent_Identity=33.3333333333333, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17552856, Length=468, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=5e-64, Organism=Drosophila melanogaster, GI21356577, Length=476, Percent_Identity=33.4033613445378, Blast_Score=265, Evalue=4e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 50081; Mature: 49950
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYN CCCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCC RMPADVALMKELGLQAYRFSVNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTL CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEE HHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVKKWVTLNEPWVITDGGYLHGA ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCEEEECCCEEEEE LAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA ECCCCCCHHCCCCHHCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHH RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQ HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEECCCEECCEEE ADPNQWPLRASPVRQNATHTTTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCC TAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWSLLDNLEWSLGYSKRFGIVHV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEEE DYETQVRTPKRSARFYSSVIRSNGGNLG CCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQTIFPDDFLWGAATAAYQIEGSPLADGAGPSIWQRFSHDPRLMAAKGDTGDIACDHYN CCCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCC RMPADVALMKELGLQAYRFSVNWGRILPEGTGRVNEPGLDFYERLVDELLRHGIEPLLTL CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEE HHWDLPAALDDRGGWLNRDSAGWFADYAAIMYRRLDGRVKKWVTLNEPWVITDGGYLHGA ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCEEEECCCEEEEE LAPGHRNMFEAPIASHNLMRAHGAAVQAYRSEGAHEIGLVVNIEPKYPASDGIEDVAAAA ECCCCCCHHCCCCHHCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHH RAHAYMNRQYLDPALKGSYPAELAEIFGEAWPQWPAEDMRSICQPVDFIGINYYTRNVVQ HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEECCCEECCEEE ADPNQWPLRASPVRQNATHTTTDWEVCPPALTDMLIWFRDTYGNIPVYITENGAAFYDPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCC TAGPAGIDDPLRCDYLRTHISAIGDAIRQGVDVRGYMAWSLLDNLEWSLGYSKRFGIVHV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCEEEE DYETQVRTPKRSARFYSSVIRSNGGNLG CCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]