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The map label for this gene is yclF [H]

Identifier: 103486444

GI number: 103486444

Start: 978688

End: 980271

Strand: Direct

Name: yclF [H]

Synonym: Sala_0954

Alternate gene names: 103486444

Gene position: 978688-980271 (Clockwise)

Preceding gene: 103486441

Following gene: 103486445

Centisome position: 29.26

GC content: 63.57

Gene sequence:

>1584_bases
ATGACCAAAGCCTATGCCCAGCACGGGGATGCCGCCGGGACGTTTCTCGGCCACCCCAAGGGGCTTTTCGTCCTTTTTTT
CGCCGAAATGTGGGAGCGTTTTTCCTATTACGGGATGCGCGCGCTGCTGATTTTCTACCTGACGAAGCACTGGCTGTTCT
CGGACAGTGAATCGGGGGTCATCTATGGCGCCTATACCGCGCTCGTCTACATCACGCCGGTGCTGGGCGGCTATCTGGCG
GACAAATGGCTGGGGCAGCGCAAGGCAGTGCTCTTCGGCGCCATATTGCTGACCTTCGGCCATTTCATCATGGGCTTCGA
GGGTGACGGCGGGCAGGATCCCGCCAGCCTCAACATCTTCTGGCTGGCGCTTGCCTTCATCATCGTCGGTTCGGGTTTCC
TGAAAGCCAATATCTCGGTGATCGTCGGCCAGCTCTATCCGCGCACCGACGTGCGCCGCGACGGCGCCTATACGATTTTC
TATATGGGGATCAACCTCGGCGCCTTCCTCGGTTCGCTGCTCTGCGGCTATCTGGGCGAAACCTATGGCTGGGCCTATGG
CTTCGGCGCCGCGGGCTTCGGGATGCTGCTGGGCCTGATCGTCTTCATCTGGGGCAAGCCGCTGCTGCTCGGCCGCGGCG
AAGCGCCCGATCCCGCCAGGCTCGCCGCGCCGGTGATGGGCATCAAGTTCGAATGGCTGCTCTATATCGTCGGTATCCTT
GCCGTCGGCGTCTGCTGGTGGATGGTGCAGAATCAGGCGGTCGTCGGCACGTTGCTCGGCGTCGCCGGGGCGATCCTCGT
CGCCTATGTCATCTTCACCGCGGTGGTGAAGCTGCCGTCGGACGATCGCGACCGCATCTTTGCCGCCATGTTCCTGATCC
TCGGTTCGATCCTGTTCTGGGCGTTGTTCGAGCAGGCGGGTTCGTCGCTCAACCTGTTCACCGATCGCTATGTCGATCGC
GCCGGGGTGCCCGCGTCGGTGTTCCAGTCGCTCAACGCCGGCTATATCGTCCTGCTGGCGCCGCTGTTCGCGATGCTGTG
GACGTGGCTCGGTCGCCGCAACATGGAGCCTTCGGCGCCGGCGAAGTTCGGCCTGGCGATGCTGCAACTGGGCCTCGGCT
TTCTTGTCCTCAAATGGGGCGCCGAAGCGGTCGGCATGGGCAATGCGACGCCGGTGCTGTTCATCTTCCTGATCTATCTG
CTCCACACGACCGGCGAACTTTGCCTGTCGCCCGTGGGGCTCAGTGCGATGAACCGTCTCGCGCCCGCGCACATGGCCTC
GCTCATCATGGGGACGTGGTTCTTCGCCTCCGCGACCGGCAATTTTGCCGCTGGCCTGATCGCCGCGGCGACGGGCTCCG
AAAAGGCGAGCGGCGAGGGTGCGGGCAAGGCGCTGGTGCTCGATGTCTATCAGACGATCGGCCTGTGGGCGATCGGCTTT
GGCGTGCTGGTGATCCTCGTGTCGCCGCTGATCAAGAAGCTGATGCACCTCGATACGCTGCGCGATGCCGATGAGCTGGC
GGGCAGCAAGGAGCTGGCCGAGCCGCAGGCGGCGGGCGTTCATCCCGAACCCAAGGGGGCGTAA

Upstream 100 bases:

>100_bases
TCGCGCGCAATTAGATTCTTCCCATACGCAATTTTGACGTTAGGTTGCGGCCATCCGCCCCGCTGCCTGGGGCCAACATC
ATATCCAGGGAAGGGTCGCC

Downstream 100 bases:

>100_bases
TTCATGAAAACGGGTGTGAAGGGCAGCCTGCTGGCTGCGGTGTCGCTGGCGCTTGTCGGCTGTGCGGCGACGGGTGGCGG
TGCGGCGTCGGCGGGCGACA

Product: amino acid/peptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MTKAYAQHGDAAGTFLGHPKGLFVLFFAEMWERFSYYGMRALLIFYLTKHWLFSDSESGVIYGAYTALVYITPVLGGYLA
DKWLGQRKAVLFGAILLTFGHFIMGFEGDGGQDPASLNIFWLALAFIIVGSGFLKANISVIVGQLYPRTDVRRDGAYTIF
YMGINLGAFLGSLLCGYLGETYGWAYGFGAAGFGMLLGLIVFIWGKPLLLGRGEAPDPARLAAPVMGIKFEWLLYIVGIL
AVGVCWWMVQNQAVVGTLLGVAGAILVAYVIFTAVVKLPSDDRDRIFAAMFLILGSILFWALFEQAGSSLNLFTDRYVDR
AGVPASVFQSLNAGYIVLLAPLFAMLWTWLGRRNMEPSAPAKFGLAMLQLGLGFLVLKWGAEAVGMGNATPVLFIFLIYL
LHTTGELCLSPVGLSAMNRLAPAHMASLIMGTWFFASATGNFAAGLIAAATGSEKASGEGAGKALVLDVYQTIGLWAIGF
GVLVILVSPLIKKLMHLDTLRDADELAGSKELAEPQAAGVHPEPKGA

Sequences:

>Translated_527_residues
MTKAYAQHGDAAGTFLGHPKGLFVLFFAEMWERFSYYGMRALLIFYLTKHWLFSDSESGVIYGAYTALVYITPVLGGYLA
DKWLGQRKAVLFGAILLTFGHFIMGFEGDGGQDPASLNIFWLALAFIIVGSGFLKANISVIVGQLYPRTDVRRDGAYTIF
YMGINLGAFLGSLLCGYLGETYGWAYGFGAAGFGMLLGLIVFIWGKPLLLGRGEAPDPARLAAPVMGIKFEWLLYIVGIL
AVGVCWWMVQNQAVVGTLLGVAGAILVAYVIFTAVVKLPSDDRDRIFAAMFLILGSILFWALFEQAGSSLNLFTDRYVDR
AGVPASVFQSLNAGYIVLLAPLFAMLWTWLGRRNMEPSAPAKFGLAMLQLGLGFLVLKWGAEAVGMGNATPVLFIFLIYL
LHTTGELCLSPVGLSAMNRLAPAHMASLIMGTWFFASATGNFAAGLIAAATGSEKASGEGAGKALVLDVYQTIGLWAIGF
GVLVILVSPLIKKLMHLDTLRDADELAGSKELAEPQAAGVHPEPKGA
>Mature_526_residues
TKAYAQHGDAAGTFLGHPKGLFVLFFAEMWERFSYYGMRALLIFYLTKHWLFSDSESGVIYGAYTALVYITPVLGGYLAD
KWLGQRKAVLFGAILLTFGHFIMGFEGDGGQDPASLNIFWLALAFIIVGSGFLKANISVIVGQLYPRTDVRRDGAYTIFY
MGINLGAFLGSLLCGYLGETYGWAYGFGAAGFGMLLGLIVFIWGKPLLLGRGEAPDPARLAAPVMGIKFEWLLYIVGILA
VGVCWWMVQNQAVVGTLLGVAGAILVAYVIFTAVVKLPSDDRDRIFAAMFLILGSILFWALFEQAGSSLNLFTDRYVDRA
GVPASVFQSLNAGYIVLLAPLFAMLWTWLGRRNMEPSAPAKFGLAMLQLGLGFLVLKWGAEAVGMGNATPVLFIFLIYLL
HTTGELCLSPVGLSAMNRLAPAHMASLIMGTWFFASATGNFAAGLIAAATGSEKASGEGAGKALVLDVYQTIGLWAIGFG
VLVILVSPLIKKLMHLDTLRDADELAGSKELAEPQAAGVHPEPKGA

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=394, Percent_Identity=27.4111675126904, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI226371746, Length=344, Percent_Identity=26.1627906976744, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI226371748, Length=341, Percent_Identity=24.633431085044, Blast_Score=86, Evalue=7e-17,
Organism=Escherichia coli, GI1789911, Length=491, Percent_Identity=31.5682281059063, Blast_Score=251, Evalue=8e-68,
Organism=Escherichia coli, GI1790572, Length=452, Percent_Identity=34.070796460177, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1786927, Length=461, Percent_Identity=31.0195227765727, Blast_Score=219, Evalue=5e-58,
Organism=Escherichia coli, GI1787922, Length=490, Percent_Identity=29.7959183673469, Blast_Score=218, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17569141, Length=356, Percent_Identity=25, Blast_Score=89, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71987453, Length=366, Percent_Identity=24.3169398907104, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17541704, Length=318, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571102, Length=346, Percent_Identity=24.2774566473988, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28571100, Length=346, Percent_Identity=24.2774566473988, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28571098, Length=340, Percent_Identity=25.2941176470588, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24639585, Length=210, Percent_Identity=27.1428571428571, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24639583, Length=210, Percent_Identity=27.1428571428571, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24639581, Length=210, Percent_Identity=27.1428571428571, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 56705; Mature: 56574

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50850 MFS ; PS01022 PTR2_1 ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAYAQHGDAAGTFLGHPKGLFVLFFAEMWERFSYYGMRALLIFYLTKHWLFSDSESGV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IYGAYTALVYITPVLGGYLADKWLGQRKAVLFGAILLTFGHFIMGFEGDGGQDPASLNIF
EEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHH
WLALAFIIVGSGFLKANISVIVGQLYPRTDVRRDGAYTIFYMGINLGAFLGSLLCGYLGE
HHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
TYGWAYGFGAAGFGMLLGLIVFIWGKPLLLGRGEAPDPARLAAPVMGIKFEWLLYIVGIL
HHCCHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
AVGVCWWMVQNQAVVGTLLGVAGAILVAYVIFTAVVKLPSDDRDRIFAAMFLILGSILFW
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ALFEQAGSSLNLFTDRYVDRAGVPASVFQSLNAGYIVLLAPLFAMLWTWLGRRNMEPSAP
HHHHHHCCCEEHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AKFGLAMLQLGLGFLVLKWGAEAVGMGNATPVLFIFLIYLLHTTGELCLSPVGLSAMNRL
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHH
APAHMASLIMGTWFFASATGNFAAGLIAAATGSEKASGEGAGKALVLDVYQTIGLWAIGF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GVLVILVSPLIKKLMHLDTLRDADELAGSKELAEPQAAGVHPEPKGA
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKAYAQHGDAAGTFLGHPKGLFVLFFAEMWERFSYYGMRALLIFYLTKHWLFSDSESGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IYGAYTALVYITPVLGGYLADKWLGQRKAVLFGAILLTFGHFIMGFEGDGGQDPASLNIF
EEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHH
WLALAFIIVGSGFLKANISVIVGQLYPRTDVRRDGAYTIFYMGINLGAFLGSLLCGYLGE
HHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
TYGWAYGFGAAGFGMLLGLIVFIWGKPLLLGRGEAPDPARLAAPVMGIKFEWLLYIVGIL
HHCCHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
AVGVCWWMVQNQAVVGTLLGVAGAILVAYVIFTAVVKLPSDDRDRIFAAMFLILGSILFW
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ALFEQAGSSLNLFTDRYVDRAGVPASVFQSLNAGYIVLLAPLFAMLWTWLGRRNMEPSAP
HHHHHHCCCEEHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AKFGLAMLQLGLGFLVLKWGAEAVGMGNATPVLFIFLIYLLHTTGELCLSPVGLSAMNRL
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHH
APAHMASLIMGTWFFASATGNFAAGLIAAATGSEKASGEGAGKALVLDVYQTIGLWAIGF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GVLVILVSPLIKKLMHLDTLRDADELAGSKELAEPQAAGVHPEPKGA
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]