| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is caiA [C]
Identifier: 103486364
GI number: 103486364
Start: 880918
End: 881808
Strand: Reverse
Name: caiA [C]
Synonym: Sala_0874
Alternate gene names: 103486364
Gene position: 881808-880918 (Counterclockwise)
Preceding gene: 103486365
Following gene: 103486362
Centisome position: 26.36
GC content: 65.88
Gene sequence:
>891_bases ATGGACCTGACCCCGAACGACGACCAGATTGCCCTTGTTTCCGCCACCGCCGACTGGTGCCGCGATCATATGCCGCTCGA AAACGCGCGCTCGCGCAGTCGCGATCTTTGGCCGCAGATCGACGCGATGGGCTGGGCCTCGATGACCGGCCCCGAAATGG AGCTGGACCACGCGACCGAAGCGCTGGTCTTTGCCGAGTTGGGCCGCTTTCTAGCGCCGGTGGCGCTGCTGTCGAGCGCC GTCGCCGCGCGCTGGGAACCCCGCCAGGTCAAAGTCGCGCTGGCCGTGACCGAGGGCAGGATGTTGCGGGTGCTGGACGG CTCCGATGCGTCGGCCGCGCTGGGCGTTGTCGATCGTCGCGCAATGCTTTTCGATCTTCCAGCAGCGTTGAGCGCGCAGC CTTCGCTCGACCCTACCGTAACGGTCGCCCGCTTCGACGAACCGCCTTCGGCTCATGCGCTTGCCGATGCCCGCGCTGCG CTGCACCTCCAGCTTGTCGCCGCTGCGTTCGCGGTCGGCTGTGCCGACGCGGCGCGTGACATGGCCGCCGGATATGCCCT GATACGCGAACAATTCGAGCGGCCGATCGGCTGGTTTCAGGCGATCAAACATATGTGCGCCGACATGGCCGTGCGCGCTG CCGTCGCTCGTTCGCAGCTATATTATGCGGCGTGCGCACTCGATTCCAACGCCGATGAAGCGGCGTTTCATGTGGCGGCG GCGAAGCGACTCGCCGACCAGGCCGCGCTGGAAAATAGCCGCGCCAACATTCAGGTGCACGGCGGGATCGGCATGACCGA CGAAGCCTTGCCCCATCTGTGCCTGAAGCGCGCGCATCTGCTACAGTTCGTCATTCCGGCCGAGCGAAGCGCCTTATTGG CCAGTGCCTGA
Upstream 100 bases:
>100_bases CTGCGCGGCTTCGCGGCCACCATCGCCGGGGGCAGCGCCCAGATCCAGCGCGACATCATCGGCGAGCGGCTGCTCGGCCT GCCCAAATCCCGGTGACACG
Downstream 100 bases:
>100_bases GATGTCAGTTGTCGACGATCGCCTGAAACTCATCCTCCAGCCAGCGGCGCAGGTCGGGATCGACCGCGCCTGCAAACCCG GCCAGCGGAAGCTGTTCGCG
Product: acyl-CoA dehydrogenase-like protein
Products: 2,3-dehydroacyl-CoA; reduced acceptor
Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase-Like; Oxidoreductase; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase Domain Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATEALVFAELGRFLAPVALLSSA VAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRRAMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAA LHLQLVAAAFAVGCADAARDMAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA
Sequences:
>Translated_296_residues MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATEALVFAELGRFLAPVALLSSA VAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRRAMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAA LHLQLVAAAFAVGCADAARDMAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA >Mature_296_residues MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATEALVFAELGRFLAPVALLSSA VAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRRAMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAA LHLQLVAAAFAVGCADAARDMAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA
Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.3.99.3
Molecular weight: Translated: 31728; Mature: 31728
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATE CCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHHHHHH ALVFAELGRFLAPVALLSSAVAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRR HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHH AMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAALHLQLVAAAFAVGCADAARD HHHEECCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure MDLTPNDDQIALVSATADWCRDHMPLENARSRSRDLWPQIDAMGWASMTGPEMELDHATE CCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCHHHHHH ALVFAELGRFLAPVALLSSAVAARWEPRQVKVALAVTEGRMLRVLDGSDASAALGVVDRR HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHH AMLFDLPAALSAQPSLDPTVTVARFDEPPSAHALADARAALHLQLVAAAFAVGCADAARD HHHEECCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAAGYALIREQFERPIGWFQAIKHMCADMAVRAAVARSQLYYAACALDSNADEAAFHVAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH AKRLADQAALENSRANIQVHGGIGMTDEALPHLCLKRAHLLQFVIPAERSALLASA HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acceptor
Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA