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The map label for this gene is yngJ [H]

Identifier: 103486365

GI number: 103486365

Start: 881813

End: 882964

Strand: Reverse

Name: yngJ [H]

Synonym: Sala_0875

Alternate gene names: 103486365

Gene position: 882964-881813 (Counterclockwise)

Preceding gene: 103486366

Following gene: 103486364

Centisome position: 26.4

GC content: 63.63

Gene sequence:

>1152_bases
ATGGACATCGGCTTTTCCCCCGATGAAGCCCGATTCCGCGACGAATGCCGCGAATGGCTGAACGCCAATGTGCCGACCGA
AAAGCGCCCCATCGACGCCGCCGAGGCGATCGTGTTCGACAAGGCGTGGCAACGGCAATTGTTCGACGCCGGCTGGGCGG
GAATCAACTGGCCGAGCGAATATGGCGGGCGCGGCCTGTCGATCGTTCAGCAGGTCATCTGGCTGGAGGAATATGCAAAG
GCCCACGCGCCGTGGATCGGCGCCAATTTCGTCGGCATCAATCACGGCGGCCCGACCCTGATCCTCAACGCCAGCGAAGA
ACAGAAGGCCTGGCATCTGCCGCGCATCCTGAAAGGCGAATCGATCTGGTGCCAGGGTTTCTCGGAGCCCGGTGCCGGAT
CGGACCTTGCCGGCATCCGGACACACGGGCGGATCGAAGGGGACGAGCTGATCGTCAACGGGTCCAAGATATGGACCAGC
TTCGCCCATGTCGCCGACTGGCAAGAGCTGGTGCTGCGCACCGAGGAAGGGTCGCGGCGGCACGCGGGGTTGAGCTGGGT
GATATGCGACATGCACACCCCCGGCATCACCGTGCGGCCGATCCGCAAGATGTCGGGGCAAACCGAATTTGCCGAAGTGT
TCTACGACGATGTCCGCATCCCGCTGGCGAATGTCGTCGGCGGACTGGGTAATGGCTGGAAAGTCGCGATGTCCACGTTG
AGCTTTGAGCGAGGCACCGGCTTCATCGCCGATCAGGTGAAGCAGAGCCAGGAAATCGAAGAACTGATCGCTACAGCGCG
CGCGAACGGCAGGATCGCGGACGATTGCATCGCCGACGATCTGGCCCAGATGCGCGCCGAGGTCGCGGCGGTGCGGGCGA
TGACCTATCGCAACATATCCGAAGTCATGCGGACGGGCCAGCCGGGGCCGGAGGCATCCGTAATCCGCCTGTTCACATCG
GAACTCGGGCAACGGCTGGAACGCATGGCAGTGCGGCTGAAAGGCGCCGCGATGCTCGATTTTCAATATGGCGACGATGA
CGAGGTCGCGGATTATCTGCGCGGCTTCGCGGCCACCATCGCCGGGGGCAGCGCCCAGATCCAGCGCGACATCATCGGCG
AGCGGCTGCTCGGCCTGCCCAAATCCCGGTGA

Upstream 100 bases:

>100_bases
TGGACACCGGCCTTTCCCATGAATTGATGCGTAATGCGGGGTTCGACCCGGCCATGCGGCAAAAGGGCGAAGCGATCGGC
AGCGCGCGAAAGGGCGGCTG

Downstream 100 bases:

>100_bases
CACGATGGACCTGACCCCGAACGACGACCAGATTGCCCTTGTTTCCGCCACCGCCGACTGGTGCCGCGATCATATGCCGC
TCGAAAACGCGCGCTCGCGC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDIGFSPDEARFRDECREWLNANVPTEKRPIDAAEAIVFDKAWQRQLFDAGWAGINWPSEYGGRGLSIVQQVIWLEEYAK
AHAPWIGANFVGINHGGPTLILNASEEQKAWHLPRILKGESIWCQGFSEPGAGSDLAGIRTHGRIEGDELIVNGSKIWTS
FAHVADWQELVLRTEEGSRRHAGLSWVICDMHTPGITVRPIRKMSGQTEFAEVFYDDVRIPLANVVGGLGNGWKVAMSTL
SFERGTGFIADQVKQSQEIEELIATARANGRIADDCIADDLAQMRAEVAAVRAMTYRNISEVMRTGQPGPEASVIRLFTS
ELGQRLERMAVRLKGAAMLDFQYGDDDEVADYLRGFAATIAGGSAQIQRDIIGERLLGLPKSR

Sequences:

>Translated_383_residues
MDIGFSPDEARFRDECREWLNANVPTEKRPIDAAEAIVFDKAWQRQLFDAGWAGINWPSEYGGRGLSIVQQVIWLEEYAK
AHAPWIGANFVGINHGGPTLILNASEEQKAWHLPRILKGESIWCQGFSEPGAGSDLAGIRTHGRIEGDELIVNGSKIWTS
FAHVADWQELVLRTEEGSRRHAGLSWVICDMHTPGITVRPIRKMSGQTEFAEVFYDDVRIPLANVVGGLGNGWKVAMSTL
SFERGTGFIADQVKQSQEIEELIATARANGRIADDCIADDLAQMRAEVAAVRAMTYRNISEVMRTGQPGPEASVIRLFTS
ELGQRLERMAVRLKGAAMLDFQYGDDDEVADYLRGFAATIAGGSAQIQRDIIGERLLGLPKSR
>Mature_383_residues
MDIGFSPDEARFRDECREWLNANVPTEKRPIDAAEAIVFDKAWQRQLFDAGWAGINWPSEYGGRGLSIVQQVIWLEEYAK
AHAPWIGANFVGINHGGPTLILNASEEQKAWHLPRILKGESIWCQGFSEPGAGSDLAGIRTHGRIEGDELIVNGSKIWTS
FAHVADWQELVLRTEEGSRRHAGLSWVICDMHTPGITVRPIRKMSGQTEFAEVFYDDVRIPLANVVGGLGNGWKVAMSTL
SFERGTGFIADQVKQSQEIEELIATARANGRIADDCIADDLAQMRAEVAAVRAMTYRNISEVMRTGQPGPEASVIRLFTS
ELGQRLERMAVRLKGAAMLDFQYGDDDEVADYLRGFAATIAGGSAQIQRDIIGERLLGLPKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=387, Percent_Identity=28.4237726098191, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI226958412, Length=386, Percent_Identity=24.3523316062176, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI4557233, Length=356, Percent_Identity=27.8089887640449, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI226958414, Length=345, Percent_Identity=25.5072463768116, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4557231, Length=337, Percent_Identity=26.4094955489614, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI187960098, Length=337, Percent_Identity=26.4094955489614, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI21361497, Length=316, Percent_Identity=28.1645569620253, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI4501857, Length=396, Percent_Identity=25.5050505050505, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI4557235, Length=221, Percent_Identity=33.9366515837104, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI76496475, Length=221, Percent_Identity=33.9366515837104, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI7656849, Length=353, Percent_Identity=24.6458923512748, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI38505218, Length=265, Percent_Identity=26.0377358490566, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI48976061, Length=307, Percent_Identity=26.3843648208469, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI211971008, Length=263, Percent_Identity=26.9961977186312, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081958, Length=396, Percent_Identity=22.7272727272727, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786223, Length=306, Percent_Identity=22.2222222222222, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17570075, Length=396, Percent_Identity=30.3030303030303, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17534899, Length=368, Percent_Identity=29.0760869565217, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=348, Percent_Identity=27.2988505747126, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17538396, Length=256, Percent_Identity=26.953125, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=337, Percent_Identity=27.893175074184, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=382, Percent_Identity=26.9633507853403, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=365, Percent_Identity=24.1095890410959, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=283, Percent_Identity=28.9752650176678, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=226, Percent_Identity=27.8761061946903, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=192, Percent_Identity=31.7708333333333, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=241, Percent_Identity=27.3858921161826, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=252, Percent_Identity=26.984126984127, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=253, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24666513, Length=301, Percent_Identity=30.2325581395349, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24646207, Length=382, Percent_Identity=28.2722513089005, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21355753, Length=400, Percent_Identity=24.25, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281363737, Length=310, Percent_Identity=29.6774193548387, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24660351, Length=213, Percent_Identity=30.5164319248826, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21356377, Length=393, Percent_Identity=24.4274809160305, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42354; Mature: 42354

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGFSPDEARFRDECREWLNANVPTEKRPIDAAEAIVFDKAWQRQLFDAGWAGINWPSE
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
YGGRGLSIVQQVIWLEEYAKAHAPWIGANFVGINHGGPTLILNASEEQKAWHLPRILKGE
HCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCHHHHHCCCHHHCCC
SIWCQGFSEPGAGSDLAGIRTHGRIEGDELIVNGSKIWTSFAHVADWQELVLRTEEGSRR
CEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
HAGLSWVICDMHTPGITVRPIRKMSGQTEFAEVFYDDVRIPLANVVGGLGNGWKVAMSTL
CCCCEEEEEECCCCCCEEHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHH
SFERGTGFIADQVKQSQEIEELIATARANGRIADDCIADDLAQMRAEVAAVRAMTYRNIS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMRTGQPGPEASVIRLFTSELGQRLERMAVRLKGAAMLDFQYGDDDEVADYLRGFAATI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
AGGSAQIQRDIIGERLLGLPKSR
CCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIGFSPDEARFRDECREWLNANVPTEKRPIDAAEAIVFDKAWQRQLFDAGWAGINWPSE
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
YGGRGLSIVQQVIWLEEYAKAHAPWIGANFVGINHGGPTLILNASEEQKAWHLPRILKGE
HCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCHHHHHCCCHHHCCC
SIWCQGFSEPGAGSDLAGIRTHGRIEGDELIVNGSKIWTSFAHVADWQELVLRTEEGSRR
CEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
HAGLSWVICDMHTPGITVRPIRKMSGQTEFAEVFYDDVRIPLANVVGGLGNGWKVAMSTL
CCCCEEEEEECCCCCCEEHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHH
SFERGTGFIADQVKQSQEIEELIATARANGRIADDCIADDLAQMRAEVAAVRAMTYRNIS
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMRTGQPGPEASVIRLFTSELGQRLERMAVRLKGAAMLDFQYGDDDEVADYLRGFAATI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
AGGSAQIQRDIIGERLLGLPKSR
CCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]