| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is camC [H]
Identifier: 103486362
GI number: 103486362
Start: 879096
End: 880289
Strand: Reverse
Name: camC [H]
Synonym: Sala_0872
Alternate gene names: 103486362
Gene position: 880289-879096 (Counterclockwise)
Preceding gene: 103486364
Following gene: 103486361
Centisome position: 26.32
GC content: 62.4
Gene sequence:
>1194_bases ATGAGTGAGTCGCCCGTGCAACCGGCGCGTTCGCCGGTGTTCGAATTCGATTATATCGCCGATCCCGGCATCCTTGCCGA TTGTCACGCACGCTATTGGGAGCTGAAGGAAACCGCGCCGCCGGTATTCTGGACCAACGCCCACGGCGGCCATTGGGTCT GCAACACCGGCGCGTCGGTGCAGCATGTGGTGCGGCACCCGGAGATATTTTCGAGCCGCTATCTGTCGATTCCCCCAAAC CCCAACCAGCCGAAGATGATTCCCGAAATGCTCGATCCGCCCGAGCACCGGCCATATCGACAGATGCTGCGCCCTTTTTT TGAATCCAAGGCGATCGAACCGCTGGAAGGACGCGTCGCCGAATGGACCGACCGCCTGCTGAGCGAAGTGGCGGACGCGG GCGAATGCGAATTCGTCGCCGCCGTCGCCTCGCGGCTGCCGGTGGCCGTGTTCATGGAATTGTTCGGCTTTCCGATGGAA CGCTTTGACGAGTTCCGGCATCTGGTCGTGGATTTTTTCGGCGCCCGCGCCAGCCCGGAGGAGCGCAACCTGCTCGCGCA GCGCATTCTGGGCCATATCGCCGAGCTGATCCAGGCGCGGATGGCGGCGCCAGAGGACGACATGATTTCGAAGATCATCG TCAGCGAAGTCGACGGCCGACGCCTGCAATTCGACGAATTGATGTCGATCGGTTTCCTGATGTTCCTTGCCGGGCTGGAT ACGGTCACAAATGCGATGAGCTTCGGAATGCGCCACCTGGCGCATGACAGCGCCTTGCGGCAGCGGGCAATCGACGATCC GGGCGTGATCCCCGATCTGGTCGAGGAATTGCTGCGACGCTATGCCTTTGTCGCGACGCCGCGCTACATCGTTCAGGATA CGGAGCTGGAGGGCGCACAGCTTCGCGCCGGCGATTGCATCCTTGCTCCCCTGCCGCTCGTCGGCTGGGACGAAGCGCTC AATCCCGACCCCGCCACGGTGTCGGTCGAGCGCCAATTCTATCGCCACGCCGCCTTCGGATCGGGAATCCACACCTGCCT GGGGCTGCATCTGGCGCGCATGGAATTGATCATTTTCTATCGCGCCTGGTTCAGCCGGATCGGCCACTTCCGCCAGGTTG AAACCGGCGACGAAAGCTGTCGCGGCGGCAGCGTGATGGCCCTCGAACATTTGCATCTGGCGTGGGACGCCTGA
Upstream 100 bases:
>100_bases CGGCATCGCGCGGCCGCAGGTCAATCTTTGTCGCCATGACGCCTCCCCGTTGACTCCCGATGTAAACGTGCGTTTACTTG TTGGCAAGAGGAGAGGATAG
Downstream 100 bases:
>100_bases CATAATTTTGGGAGAAAAGAGCATGGCAAGCGCAGCACCCGCGGTGCATCTGCATCTGGGACATGAGCAACGCACGAGCG GCACGGGTGGGACGCATTCG
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450-cam; Cytochrome P450cam [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSESPVQPARSPVFEFDYIADPGILADCHARYWELKETAPPVFWTNAHGGHWVCNTGASVQHVVRHPEIFSSRYLSIPPN PNQPKMIPEMLDPPEHRPYRQMLRPFFESKAIEPLEGRVAEWTDRLLSEVADAGECEFVAAVASRLPVAVFMELFGFPME RFDEFRHLVVDFFGARASPEERNLLAQRILGHIAELIQARMAAPEDDMISKIIVSEVDGRRLQFDELMSIGFLMFLAGLD TVTNAMSFGMRHLAHDSALRQRAIDDPGVIPDLVEELLRRYAFVATPRYIVQDTELEGAQLRAGDCILAPLPLVGWDEAL NPDPATVSVERQFYRHAAFGSGIHTCLGLHLARMELIIFYRAWFSRIGHFRQVETGDESCRGGSVMALEHLHLAWDA
Sequences:
>Translated_397_residues MSESPVQPARSPVFEFDYIADPGILADCHARYWELKETAPPVFWTNAHGGHWVCNTGASVQHVVRHPEIFSSRYLSIPPN PNQPKMIPEMLDPPEHRPYRQMLRPFFESKAIEPLEGRVAEWTDRLLSEVADAGECEFVAAVASRLPVAVFMELFGFPME RFDEFRHLVVDFFGARASPEERNLLAQRILGHIAELIQARMAAPEDDMISKIIVSEVDGRRLQFDELMSIGFLMFLAGLD TVTNAMSFGMRHLAHDSALRQRAIDDPGVIPDLVEELLRRYAFVATPRYIVQDTELEGAQLRAGDCILAPLPLVGWDEAL NPDPATVSVERQFYRHAAFGSGIHTCLGLHLARMELIIFYRAWFSRIGHFRQVETGDESCRGGSVMALEHLHLAWDA >Mature_396_residues SESPVQPARSPVFEFDYIADPGILADCHARYWELKETAPPVFWTNAHGGHWVCNTGASVQHVVRHPEIFSSRYLSIPPNP NQPKMIPEMLDPPEHRPYRQMLRPFFESKAIEPLEGRVAEWTDRLLSEVADAGECEFVAAVASRLPVAVFMELFGFPMER FDEFRHLVVDFFGARASPEERNLLAQRILGHIAELIQARMAAPEDDMISKIIVSEVDGRRLQFDELMSIGFLMFLAGLDT VTNAMSFGMRHLAHDSALRQRAIDDPGVIPDLVEELLRRYAFVATPRYIVQDTELEGAQLRAGDCILAPLPLVGWDEALN PDPATVSVERQFYRHAAFGSGIHTCLGLHLARMELIIFYRAWFSRIGHFRQVETGDESCRGGSVMALEHLHLAWDA
Specific function: Involved in a camphor oxidation system [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.15.1 [H]
Molecular weight: Translated: 44861; Mature: 44730
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPVQPARSPVFEFDYIADPGILADCHARYWELKETAPPVFWTNAHGGHWVCNTGASV CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCHH QHVVRHPEIFSSRYLSIPPNPNQPKMIPEMLDPPEHRPYRQMLRPFFESKAIEPLEGRVA HHHHHCCHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH EWTDRLLSEVADAGECEFVAAVASRLPVAVFMELFGFPMERFDEFRHLVVDFFGARASPE HHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH ERNLLAQRILGHIAELIQARMAAPEDDMISKIIVSEVDGRRLQFDELMSIGFLMFLAGLD HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TVTNAMSFGMRHLAHDSALRQRAIDDPGVIPDLVEELLRRYAFVATPRYIVQDTELEGAQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCE LRAGDCILAPLPLVGWDEALNPDPATVSVERQFYRHAAFGSGIHTCLGLHLARMELIIFY EECCCEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RAWFSRIGHFRQVETGDESCRGGSVMALEHLHLAWDA HHHHHHHCCHHCCCCCCCCCCCCCEEHHHHHHHHCCC >Mature Secondary Structure SESPVQPARSPVFEFDYIADPGILADCHARYWELKETAPPVFWTNAHGGHWVCNTGASV CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCHH QHVVRHPEIFSSRYLSIPPNPNQPKMIPEMLDPPEHRPYRQMLRPFFESKAIEPLEGRVA HHHHHCCHHHHCCEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH EWTDRLLSEVADAGECEFVAAVASRLPVAVFMELFGFPMERFDEFRHLVVDFFGARASPE HHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH ERNLLAQRILGHIAELIQARMAAPEDDMISKIIVSEVDGRRLQFDELMSIGFLMFLAGLD HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TVTNAMSFGMRHLAHDSALRQRAIDDPGVIPDLVEELLRRYAFVATPRYIVQDTELEGAQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCE LRAGDCILAPLPLVGWDEALNPDPATVSVERQFYRHAAFGSGIHTCLGLHLARMELIIFY EECCCEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RAWFSRIGHFRQVETGDESCRGGSVMALEHLHLAWDA HHHHHHHCCHHCCCCCCCCCCCCCEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3003058; 2613690; 7130171; 3813557; 2578028; 1610873; 12237225; 4066706; 9357977; 9649301; 10557259; 10698731; 11098139; 11258878; 11606730; 12464241; 9315686 [H]