Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486317

Identifier: 103486317

GI number: 103486317

Start: 831276

End: 832121

Strand: Reverse

Name: 103486317

Synonym: Sala_0827

Alternate gene names: NA

Gene position: 832121-831276 (Counterclockwise)

Preceding gene: 103486319

Following gene: 103486316

Centisome position: 24.88

GC content: 52.48

Gene sequence:

>846_bases
TTGGTTGCCCAAGATAAATTAGTTCGTGAAGCGCTTTCCGTCTTGGAAGAACTGTTCCCGAACCTTACCTTGGAAAAGCC
CGTTGTATCGGTACGCGCGGTATCGCAAGACAGCCCACTCAGGACGAACCTAGAGGCCCTAGTTGTGGCAGCATATGCCA
CGGAGCTTGGACAAGACGTGCCAGACATTCTGAACACCCTTTTTGGCGTAAATGTACCAGATACTTACGATTCCGTAGTG
TCGGTCCTCGTCCTGCTTATCGCCATATGGGGTATCGATTGGGTTCGAACCAAAATTTTCCCTGGAAAAAAAGAAAAAGC
CTTGGATCAAGAGCGGGAACGGCTTTTAAAGGAAGCGGCAGACCGAGCATCTGTCACAGAAGAGCACCTTGAAGAGGCCA
TCGAGCGGACGCTAAGAAAGCACAAGCGCTCCGTAATGAAAGCATCGGCGGACTTCTTAGAACCGGCAAAGCGCCACAAG
GCGACTGCGGTGAAAGTCGCCGGTACCGAAATTTCGCAGGAGGCGATCGAGGCGATGCCGTCGGAGGTCGATCTCGCTCA
GTACGAACCGCCGACCGAGACGGAAGAACTGGAGCGCGTGACTGTTCATTTCCGGGCTCACGATTTGGACAAGAACAAGG
CTTGGGCCGCAACCATCGAAGAGGTATTTCCGCACCGTCGGCCTTTGCATCTAGCGCCCCATATCAATGGCGAGGATCTC
TTTGAAAAGTCAGAAGTGATTGCGGATGTTATTGTCACTTCCGAGTTGGACAGCAGCGGGGAGTACGTCCCTCGCTTCTA
CTACCTTCAAAAAGTGTATGAAACAGACGAAAGCCCCGGAGATTGA

Upstream 100 bases:

>100_bases
ATTCTCCTGAATATCGGGGGTTTTCATGGACATCGTAATTCCACATTCGGTAACGTACGATTTTGATGGCCGAGCGAGCG
TTTCCGAAGTCGCAAAGAGT

Downstream 100 bases:

>100_bases
GTGTAAGCGAACAGGCGTTCCATGACACTTCCATGACACTCCCTGTCACAAACACGTCACACAAAACCCCCATTGGGCGC
TCAGCGAGTCGCCGCGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVAQDKLVREALSVLEELFPNLTLEKPVVSVRAVSQDSPLRTNLEALVVAAYATELGQDVPDILNTLFGVNVPDTYDSVV
SVLVLLIAIWGIDWVRTKIFPGKKEKALDQERERLLKEAADRASVTEEHLEEAIERTLRKHKRSVMKASADFLEPAKRHK
ATAVKVAGTEISQEAIEAMPSEVDLAQYEPPTETEELERVTVHFRAHDLDKNKAWAATIEEVFPHRRPLHLAPHINGEDL
FEKSEVIADVIVTSELDSSGEYVPRFYYLQKVYETDESPGD

Sequences:

>Translated_281_residues
MVAQDKLVREALSVLEELFPNLTLEKPVVSVRAVSQDSPLRTNLEALVVAAYATELGQDVPDILNTLFGVNVPDTYDSVV
SVLVLLIAIWGIDWVRTKIFPGKKEKALDQERERLLKEAADRASVTEEHLEEAIERTLRKHKRSVMKASADFLEPAKRHK
ATAVKVAGTEISQEAIEAMPSEVDLAQYEPPTETEELERVTVHFRAHDLDKNKAWAATIEEVFPHRRPLHLAPHINGEDL
FEKSEVIADVIVTSELDSSGEYVPRFYYLQKVYETDESPGD
>Mature_281_residues
MVAQDKLVREALSVLEELFPNLTLEKPVVSVRAVSQDSPLRTNLEALVVAAYATELGQDVPDILNTLFGVNVPDTYDSVV
SVLVLLIAIWGIDWVRTKIFPGKKEKALDQERERLLKEAADRASVTEEHLEEAIERTLRKHKRSVMKASADFLEPAKRHK
ATAVKVAGTEISQEAIEAMPSEVDLAQYEPPTETEELERVTVHFRAHDLDKNKAWAATIEEVFPHRRPLHLAPHINGEDL
FEKSEVIADVIVTSELDSSGEYVPRFYYLQKVYETDESPGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31636; Mature: 31636

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAQDKLVREALSVLEELFPNLTLEKPVVSVRAVSQDSPLRTNLEALVVAAYATELGQDV
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHH
PDILNTLFGVNVPDTYDSVVSVLVLLIAIWGIDWVRTKIFPGKKEKALDQERERLLKEAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DRASVTEEHLEEAIERTLRKHKRSVMKASADFLEPAKRHKATAVKVAGTEISQEAIEAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCC
SEVDLAQYEPPTETEELERVTVHFRAHDLDKNKAWAATIEEVFPHRRPLHLAPHINGEDL
CCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHH
FEKSEVIADVIVTSELDSSGEYVPRFYYLQKVYETDESPGD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVAQDKLVREALSVLEELFPNLTLEKPVVSVRAVSQDSPLRTNLEALVVAAYATELGQDV
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHH
PDILNTLFGVNVPDTYDSVVSVLVLLIAIWGIDWVRTKIFPGKKEKALDQERERLLKEAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DRASVTEEHLEEAIERTLRKHKRSVMKASADFLEPAKRHKATAVKVAGTEISQEAIEAMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHCC
SEVDLAQYEPPTETEELERVTVHFRAHDLDKNKAWAATIEEVFPHRRPLHLAPHINGEDL
CCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHH
FEKSEVIADVIVTSELDSSGEYVPRFYYLQKVYETDESPGD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA