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The map label for this gene is dcd

Identifier: 103486254

GI number: 103486254

Start: 770669

End: 771223

Strand: Reverse

Name: dcd

Synonym: Sala_0762

Alternate gene names: 103486254

Gene position: 771223-770669 (Counterclockwise)

Preceding gene: 103486255

Following gene: 103486253

Centisome position: 23.05

GC content: 60.9

Gene sequence:

>555_bases
ATGGCCATTCTTTCCGATCGCTGGATTCGCGAAGCCGCCCGGACGCAGGGCATGATCGAACCCTTTGTCGAGGCGCAGCG
GCGCGATGGCTGCATCAGCTATGGCCTCTCCTCCTACGGCTATGACGCGCGCGTCGCGCCCGAGTTCAAGATTTTCACCA
ATGTCGACAGCACCATCGTCGATCCCAAGGATTTCGATCCCAAGAATTTCGTCGACCGCGAAACCGACGTCTGCATCATC
CCGCCGAACAGCTTCGCCCTCGCGCGCACCGTCGAGTATTTCCGCATCCCGCGCGATGTGCTCGTCATCTGCCTTGGCAA
ATCGACCTATGCGCGTTGCGGTATCATCGTGAACGTCACCCCGCTGGAACCGGGGTGGGAGGGGCATGTGACGCTGGAGT
TTTCGAACACCACCCCCCTGCCCGCCAGGATTTACGCCAATGAAGGCGCCTGCCAGTTCCTCTTCCTTCAGGGCAATGAA
CCGTGCGAGACGAGCTACGCCGACCGCGCGGGCAAATATATGGGGCAGAAGGGCGTGACGCTGCCGAAGCTGTAG

Upstream 100 bases:

>100_bases
CAAGCTCAGCGAGCTGCTTCCCGCAGCGTTCGGGCCGAAGGATCTGGGGCTGATCGACTGACCGCTTGCGCAACACCTCC
CATCCCGACAAGAGACACGC

Downstream 100 bases:

>100_bases
GGCGATTGCACCGCGAAAGATCGCCGTCTTGGGGTGGTGAGCTGCCCTTGGCCTGTGCGTCATGCTGAACTTGTTTCAGC
ATGACGATGAGCGAAATGTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAILSDRWIREAARTQGMIEPFVEAQRRDGCISYGLSSYGYDARVAPEFKIFTNVDSTIVDPKDFDPKNFVDRETDVCII
PPNSFALARTVEYFRIPRDVLVICLGKSTYARCGIIVNVTPLEPGWEGHVTLEFSNTTPLPARIYANEGACQFLFLQGNE
PCETSYADRAGKYMGQKGVTLPKL

Sequences:

>Translated_184_residues
MAILSDRWIREAARTQGMIEPFVEAQRRDGCISYGLSSYGYDARVAPEFKIFTNVDSTIVDPKDFDPKNFVDRETDVCII
PPNSFALARTVEYFRIPRDVLVICLGKSTYARCGIIVNVTPLEPGWEGHVTLEFSNTTPLPARIYANEGACQFLFLQGNE
PCETSYADRAGKYMGQKGVTLPKL
>Mature_183_residues
AILSDRWIREAARTQGMIEPFVEAQRRDGCISYGLSSYGYDARVAPEFKIFTNVDSTIVDPKDFDPKNFVDRETDVCIIP
PNSFALARTVEYFRIPRDVLVICLGKSTYARCGIIVNVTPLEPGWEGHVTLEFSNTTPLPARIYANEGACQFLFLQGNEP
CETSYADRAGKYMGQKGVTLPKL

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_SPHAL (Q1GV40)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615815.1
- ProteinModelPortal:   Q1GV40
- SMR:   Q1GV40
- GeneID:   4080905
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0762
- NMPDR:   fig|317655.9.peg.711
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- BioCyc:   SALA317655:SALA_0762-MONOMER
- BRENDA:   3.5.4.13
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 20614; Mature: 20482

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILSDRWIREAARTQGMIEPFVEAQRRDGCISYGLSSYGYDARVAPEFKIFTNVDSTIV
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCEECCCEEEEECCCCEEE
DPKDFDPKNFVDRETDVCIIPPNSFALARTVEYFRIPRDVLVICLGKSTYARCGIIVNVT
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCCEEEEEEE
PLEPGWEGHVTLEFSNTTPLPARIYANEGACQFLFLQGNEPCETSYADRAGKYMGQKGVT
ECCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCC
LPKL
CCCC
>Mature Secondary Structure 
AILSDRWIREAARTQGMIEPFVEAQRRDGCISYGLSSYGYDARVAPEFKIFTNVDSTIV
CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCEECCCEEEEECCCCEEE
DPKDFDPKNFVDRETDVCIIPPNSFALARTVEYFRIPRDVLVICLGKSTYARCGIIVNVT
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCCEEEEEEE
PLEPGWEGHVTLEFSNTTPLPARIYANEGACQFLFLQGNEPCETSYADRAGKYMGQKGVT
ECCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCC
LPKL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA