Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486220

Identifier: 103486220

GI number: 103486220

Start: 732977

End: 733417

Strand: Direct

Name: 103486220

Synonym: Sala_0727

Alternate gene names: NA

Gene position: 732977-733417 (Clockwise)

Preceding gene: 103486219

Following gene: 103486221

Centisome position: 21.91

GC content: 69.16

Gene sequence:

>441_bases
GTGCAGCGCGCCCAGGTCGAAAATCTCTATGTCGAGGCGATGTTGCTCGCCGACGAGGCGCACGCGGCCTTTGCCGCGCA
GCGCGACCTGGGCCTTGGCGAGGATGGCGCGCGGAAAGGCGATGCGCTGGCGCAGATTTCATTGGCGTGCGAATCGCTGA
AGACGACAACGCGGCTGATGCACATCATCGCCTGGTTGCTCCACCGCCGCGCGATGCTGGCGGGGGATCCCGGCGCTGGC
CCCGGTGACAGTGCGGCGCGGATTGGCGAACCGGTGGTGGCCGACTGGGCAGTCTGCGCCAGTTTCGATGCGTCGCTTCG
CCGCATCATCGGCGCGAGCGAGCGCCTGTTCGAGCGGATCGCGCTGATCGAGGCGGGCTGGAACGCCCCCGCGGCGACGC
CCGTGCAGCAGTTGCTGGCCCGGCTCGAAGCGCGGCTTTGA

Upstream 100 bases:

>100_bases
CAGATTTCATGGTTAGCGCCATTGCCCGATCCATGTTCGGCGTGGCATTTCCACCGTCATGGACGACGAACGAACGGGCC
TGATGACGCGGAGCAGCTCC

Downstream 100 bases:

>100_bases
CGCGCCCGCGCGCGGGCGGCGCAGCGGGCCCGCGTTCCCCCCCTCGACGGACCGCCTTGTGCAGCCACAGCTTGCCATAA
TGACCATTTTATGAACTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MQRAQVENLYVEAMLLADEAHAAFAAQRDLGLGEDGARKGDALAQISLACESLKTTTRLMHIIAWLLHRRAMLAGDPGAG
PGDSAARIGEPVVADWAVCASFDASLRRIIGASERLFERIALIEAGWNAPAATPVQQLLARLEARL

Sequences:

>Translated_146_residues
MQRAQVENLYVEAMLLADEAHAAFAAQRDLGLGEDGARKGDALAQISLACESLKTTTRLMHIIAWLLHRRAMLAGDPGAG
PGDSAARIGEPVVADWAVCASFDASLRRIIGASERLFERIALIEAGWNAPAATPVQQLLARLEARL
>Mature_146_residues
MQRAQVENLYVEAMLLADEAHAAFAAQRDLGLGEDGARKGDALAQISLACESLKTTTRLMHIIAWLLHRRAMLAGDPGAG
PGDSAARIGEPVVADWAVCASFDASLRRIIGASERLFERIALIEAGWNAPAATPVQQLLARLEARL

Specific function: Unknown

COG id: COG5317

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15642; Mature: 15642

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRAQVENLYVEAMLLADEAHAAFAAQRDLGLGEDGARKGDALAQISLACESLKTTTRLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HIIAWLLHRRAMLAGDPGAGPGDSAARIGEPVVADWAVCASFDASLRRIIGASERLFERI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ALIEAGWNAPAATPVQQLLARLEARL
HHHHCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQRAQVENLYVEAMLLADEAHAAFAAQRDLGLGEDGARKGDALAQISLACESLKTTTRLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HIIAWLLHRRAMLAGDPGAGPGDSAARIGEPVVADWAVCASFDASLRRIIGASERLFERI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
ALIEAGWNAPAATPVQQLLARLEARL
HHHHCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA