| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486219
Identifier: 103486219
GI number: 103486219
Start: 732647
End: 732844
Strand: Direct
Name: 103486219
Synonym: Sala_0726
Alternate gene names: NA
Gene position: 732647-732844 (Clockwise)
Preceding gene: 103486218
Following gene: 103486220
Centisome position: 21.9
GC content: 65.66
Gene sequence:
>198_bases GTGAGCCCCGAAGAGATCAGCCAGCGCCTCGAACTTCTGCGCATCGAGCACCGCGACCTCGACGCCGCGATCATCGCGCT CGCCAGCGCGGCGGTTTCCGACCAGCTCCAGCTCGCGCGGCTCAAGAAACGCAAGCTTAAGCTGCGCGACGAGATCGCCT GGTGCGAGGATCAGCTGCTCCCCGACATCATCGCCTGA
Upstream 100 bases:
>100_bases TGGGCAGAGCCGAGTAAATCATGAATCGGCCGGAATGTCGTTACGATTCGGCCAGTCGGTCCCCGTTGCGGACCAATGGT GAACGTGGCAGGGTTGCCGC
Downstream 100 bases:
>100_bases ACGCATCGGTCAAAGCGGGACAGCCGCGGTTTCAGATTTCATGGTTAGCGCCATTGCCCGATCCATGTTCGGCGTGGCAT TTCCACCGTCATGGACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSPEEISQRLELLRIEHRDLDAAIIALASAAVSDQLQLARLKKRKLKLRDEIAWCEDQLLPDIIA
Sequences:
>Translated_65_residues MSPEEISQRLELLRIEHRDLDAAIIALASAAVSDQLQLARLKKRKLKLRDEIAWCEDQLLPDIIA >Mature_64_residues SPEEISQRLELLRIEHRDLDAAIIALASAAVSDQLQLARLKKRKLKLRDEIAWCEDQLLPDIIA
Specific function: Unknown
COG id: COG5481
COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7435; Mature: 7304
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEEISQRLELLRIEHRDLDAAIIALASAAVSDQLQLARLKKRKLKLRDEIAWCEDQLL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PDIIA HHHCC >Mature Secondary Structure SPEEISQRLELLRIEHRDLDAAIIALASAAVSDQLQLARLKKRKLKLRDEIAWCEDQLL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PDIIA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA