Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486221

Identifier: 103486221

GI number: 103486221

Start: 733737

End: 734429

Strand: Direct

Name: 103486221

Synonym: Sala_0728

Alternate gene names: NA

Gene position: 733737-734429 (Clockwise)

Preceding gene: 103486220

Following gene: 103486222

Centisome position: 21.93

GC content: 66.67

Gene sequence:

>693_bases
ATGGCCGAGATGCGGACGCCGCGCCTGAGCGTCGATATCGTGTCCGACGTCATGTGCCCCTGGTGCATCATCGGCTGGTT
GAAGTTCGAGCGGGTGATGGATCATTTCGACGGGCGGCTCGATTTCCGCGTCCAGTGGCATCCCTTCGAGCTCAACCCCG
ATATGCCGCCCGAAGGCGAGGATGCCGCCGCGCATGTCATGCGCAAATATGGCATCAGCGCCGAACAGAGCCGCGCCAAT
ACGGGCCGGCTCGCCGCCATTGCCGGCGAACTGGGTTTCGCCTTCAACCGCGGACCGGGTTTCCGGATGCGCAACAGTTT
CGACGCGCACCGTCTGCTGACCTGGGCGGGCGCCAGCGAGGTGCCGGACCAGGCGGCGCCGACCGGTGTGCAGACCGCGC
TCAAGCTGGCGTTGTTCAGGGCGCATTTCACCGACAATCGCGATGTCAGCGACCATGATGTGCTCGCCGATGTCGCGGCG
TCGGTCGGACTCGACCGCGCGCGCGCAGCCGCCATATTGGCCTCGGACGAGTTCGGCGCGATGGTGCGGACCGAAGAGAG
CTGGTGGGCCGACCGCAACATCACCGGGGTGCCCGCTTTCATCCTCGGCGGGCAGATGCTGGTGCCGGGGGCGCAGGACC
CCGAGGTGTTCATCCGCGTGATCGAGAAGAAGGTGCTCGCGCCCGCTGCGTGA

Upstream 100 bases:

>100_bases
TCAAGGGGCCGGAGCGTCGCAAGGGCGACCGGCGCACAGACAAGGACCGCCGATCGGGCGATTGAGCGCGGAAGCAGCGG
GCGCCGACGGGAGAAATGAC

Downstream 100 bases:

>100_bases
CGTGTCTTGCATGGCCCGCACCCCGTGAGGGGAAGAGTCCATTTCTTCGGGATTTTTCAAGGACTGCGCCCTAAGGCGGG
GCGGATGAGGCTAATCGGGG

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: Dsba Oxidoreductase; Dithiol-Disulfide Isomerase; FrnE Protein; Protein Dithiol-Disulfide Isomerase; Polyketide Biosynthesis Associated Protein; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Thiol Oxidoreductase FrnE; Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; DSBA-Like Thioredoxin Family Protein; DsbA Oxidoreductase; Polyketide Synthase; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; Protein-Disulfide Isomerase; Dsba Oxidoreductase Family Protein; Dithiol-Disulfide Isomerase Protein; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; Isomerase; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; Disulfide Isomerase; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; DsbA Family Oxidoreductase

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGEDAAAHVMRKYGISAEQSRAN
TGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASEVPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAA
SVGLDRARAAAILASDEFGAMVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA

Sequences:

>Translated_230_residues
MAEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGEDAAAHVMRKYGISAEQSRAN
TGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASEVPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAA
SVGLDRARAAAILASDEFGAMVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA
>Mature_229_residues
AEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGEDAAAHVMRKYGISAEQSRANT
GRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASEVPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAAS
VGLDRARAAAILASDEFGAMVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25331; Mature: 25200

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC
DAAAHVMRKYGISAEQSRANTGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASE
HHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHCCEECCCCCCCCCCCCCHHHHEEECCCCC
VPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAASVGLDRARAAAILASDEFGA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEEECCCCCC
MVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA
EEECCHHHCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC
DAAAHVMRKYGISAEQSRANTGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASE
HHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHCCEECCCCCCCCCCCCCHHHHEEECCCCC
VPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAASVGLDRARAAAILASDEFGA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEEECCCCCC
MVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA
EEECCHHHCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA