| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486221
Identifier: 103486221
GI number: 103486221
Start: 733737
End: 734429
Strand: Direct
Name: 103486221
Synonym: Sala_0728
Alternate gene names: NA
Gene position: 733737-734429 (Clockwise)
Preceding gene: 103486220
Following gene: 103486222
Centisome position: 21.93
GC content: 66.67
Gene sequence:
>693_bases ATGGCCGAGATGCGGACGCCGCGCCTGAGCGTCGATATCGTGTCCGACGTCATGTGCCCCTGGTGCATCATCGGCTGGTT GAAGTTCGAGCGGGTGATGGATCATTTCGACGGGCGGCTCGATTTCCGCGTCCAGTGGCATCCCTTCGAGCTCAACCCCG ATATGCCGCCCGAAGGCGAGGATGCCGCCGCGCATGTCATGCGCAAATATGGCATCAGCGCCGAACAGAGCCGCGCCAAT ACGGGCCGGCTCGCCGCCATTGCCGGCGAACTGGGTTTCGCCTTCAACCGCGGACCGGGTTTCCGGATGCGCAACAGTTT CGACGCGCACCGTCTGCTGACCTGGGCGGGCGCCAGCGAGGTGCCGGACCAGGCGGCGCCGACCGGTGTGCAGACCGCGC TCAAGCTGGCGTTGTTCAGGGCGCATTTCACCGACAATCGCGATGTCAGCGACCATGATGTGCTCGCCGATGTCGCGGCG TCGGTCGGACTCGACCGCGCGCGCGCAGCCGCCATATTGGCCTCGGACGAGTTCGGCGCGATGGTGCGGACCGAAGAGAG CTGGTGGGCCGACCGCAACATCACCGGGGTGCCCGCTTTCATCCTCGGCGGGCAGATGCTGGTGCCGGGGGCGCAGGACC CCGAGGTGTTCATCCGCGTGATCGAGAAGAAGGTGCTCGCGCCCGCTGCGTGA
Upstream 100 bases:
>100_bases TCAAGGGGCCGGAGCGTCGCAAGGGCGACCGGCGCACAGACAAGGACCGCCGATCGGGCGATTGAGCGCGGAAGCAGCGG GCGCCGACGGGAGAAATGAC
Downstream 100 bases:
>100_bases CGTGTCTTGCATGGCCCGCACCCCGTGAGGGGAAGAGTCCATTTCTTCGGGATTTTTCAAGGACTGCGCCCTAAGGCGGG GCGGATGAGGCTAATCGGGG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Dsba Oxidoreductase; Dithiol-Disulfide Isomerase; FrnE Protein; Protein Dithiol-Disulfide Isomerase; Polyketide Biosynthesis Associated Protein; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Thiol Oxidoreductase FrnE; Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; DSBA-Like Thioredoxin Family Protein; DsbA Oxidoreductase; Polyketide Synthase; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; DSBA-Like Thioredoxin Domain; Dsb Family Thioredoxin Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; Protein-Disulfide Isomerase; Dsba Oxidoreductase Family Protein; Dithiol-Disulfide Isomerase Protein; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; Isomerase; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; Disulfide Isomerase; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; DsbA Family Oxidoreductase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGEDAAAHVMRKYGISAEQSRAN TGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASEVPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAA SVGLDRARAAAILASDEFGAMVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA
Sequences:
>Translated_230_residues MAEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGEDAAAHVMRKYGISAEQSRAN TGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASEVPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAA SVGLDRARAAAILASDEFGAMVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA >Mature_229_residues AEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGEDAAAHVMRKYGISAEQSRANT GRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASEVPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAAS VGLDRARAAAILASDEFGAMVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25331; Mature: 25200
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC DAAAHVMRKYGISAEQSRANTGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASE HHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHCCEECCCCCCCCCCCCCHHHHEEECCCCC VPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAASVGLDRARAAAILASDEFGA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEEECCCCCC MVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA EEECCHHHCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure AEMRTPRLSVDIVSDVMCPWCIIGWLKFERVMDHFDGRLDFRVQWHPFELNPDMPPEGE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC DAAAHVMRKYGISAEQSRANTGRLAAIAGELGFAFNRGPGFRMRNSFDAHRLLTWAGASE HHHHHHHHHHCCCCHHHCCCCCCEEEEEHHHCCEECCCCCCCCCCCCCHHHHEEECCCCC VPDQAAPTGVQTALKLALFRAHFTDNRDVSDHDVLADVAASVGLDRARAAAILASDEFGA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHEEEEECCCCCC MVRTEESWWADRNITGVPAFILGGQMLVPGAQDPEVFIRVIEKKVLAPAA EEECCHHHCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA