Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103486203

Identifier: 103486203

GI number: 103486203

Start: 715452

End: 715667

Strand: Direct

Name: 103486203

Synonym: Sala_0710

Alternate gene names: NA

Gene position: 715452-715667 (Clockwise)

Preceding gene: 103486201

Following gene: 103486207

Centisome position: 21.39

GC content: 62.5

Gene sequence:

>216_bases
ATGCACCTGCCAGCCCCTTTTCTCAGCGACCGCACCGCGGTCGAGGACGCGAATGCGCTTATCAGCCTGCATGGTGAAGA
GGCCGGATTTGCGGCAGCGGCGCGCGCCGAACAATATCGGGCGTTGGGCAACCATGTCCATTTCGCGCGCTGGCGGCAGA
TCGAGCGGCTGATCACCTATCTGTCGGTCGACGACGTCCTCGACACAGTTCACTGA

Upstream 100 bases:

>100_bases
CGCGGTCGATTAACCTTACCCGGCCGTTCATCACGGTTGGGAACGGCGCGGTGAGGGGCAGGGCGTAGAGCAGGCGTTCC
AGTCACGGACCAGGAAGCCG

Downstream 100 bases:

>100_bases
GCCTGAATCCGCAGCCCCGCGGTTTCGGGCAATCCGGCCATGATATTGAGGTTCTGGACGCACGCGCCGCTGGCGCCCTT
GCCCAGATTGTCGAGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MHLPAPFLSDRTAVEDANALISLHGEEAGFAAAARAEQYRALGNHVHFARWRQIERLITYLSVDDVLDTVH

Sequences:

>Translated_71_residues
MHLPAPFLSDRTAVEDANALISLHGEEAGFAAAARAEQYRALGNHVHFARWRQIERLITYLSVDDVLDTVH
>Mature_71_residues
MHLPAPFLSDRTAVEDANALISLHGEEAGFAAAARAEQYRALGNHVHFARWRQIERLITYLSVDDVLDTVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7955; Mature: 7955

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLPAPFLSDRTAVEDANALISLHGEEAGFAAAARAEQYRALGNHVHFARWRQIERLITY
CCCCCCCCCCCCHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSVDDVLDTVH
HHHHHHHHHCC
>Mature Secondary Structure
MHLPAPFLSDRTAVEDANALISLHGEEAGFAAAARAEQYRALGNHVHFARWRQIERLITY
CCCCCCCCCCCCHHHCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSVDDVLDTVH
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA