Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486179

Identifier: 103486179

GI number: 103486179

Start: 695191

End: 695628

Strand: Reverse

Name: 103486179

Synonym: Sala_0686

Alternate gene names: NA

Gene position: 695628-695191 (Counterclockwise)

Preceding gene: 103486180

Following gene: 103486178

Centisome position: 20.79

GC content: 61.19

Gene sequence:

>438_bases
ATGGCTCGCAGCGACTTTCGTTTCCACGTCACCAAGCGCGTCCGCTATGCCGAAATCGACGCGCAGGCGGTCGTTTTCAA
CAGCCGCTACCTCGAGTATTTTGACCTCGGCATCACCGAATACTGGCGCGCGGCGGGGGTCTATGATCGCTGGCCGCTCC
GCGACAGCCCCGAGTTCCACGTCGCGCGTGCCGAGGTCGATTACAAGGCGCCGATCCTGCTCGACGAAGAGATCGACATT
TGCGTGCGCGCGGCGCGCGTGGGCAAAAGTTCGATGACCTTCCTGTTCGAACTGCACGGCAAGGGCAAGGATGAGCTGCG
CGCCGCCGGCACGATCGTCAACGTTCATGTCGAGGAAGCGCAAGGGGCGACAGCGCCAGTGCCCGATGAATTCGTATCTT
TGTTCGAAGCGTTTGAAGGTCGGCCACTTCGTGCCTAA

Upstream 100 bases:

>100_bases
CGCGCTTGGCGGCCGGAAACTAAAGCTTGATTGAAAAAGCCTCGTTCCCCCGCGAAGGCGAGGGCACGGCTTTTCCATTC
ACCGATGTCCGAGGATGTTC

Downstream 100 bases:

>100_bases
TAGGGGCGCATGACCAGATATCTTCACACGATGATCCGCGTGTCAGACCCGCAGGCGACGATCGACTTTTTCAGGCTGAT
CGGGCTGGAGGAAGTGCGCC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: 4-Hydroxybenzoyl-CoA Thioesterase; GCN5-Related N-Acetyltransferase; Thioesterase; Acyl-CoA Thioester Hydrolase; Thioesterase Protein; Thioesterase Family Protein; Thioesterase-Like Protein

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MARSDFRFHVTKRVRYAEIDAQAVVFNSRYLEYFDLGITEYWRAAGVYDRWPLRDSPEFHVARAEVDYKAPILLDEEIDI
CVRAARVGKSSMTFLFELHGKGKDELRAAGTIVNVHVEEAQGATAPVPDEFVSLFEAFEGRPLRA

Sequences:

>Translated_145_residues
MARSDFRFHVTKRVRYAEIDAQAVVFNSRYLEYFDLGITEYWRAAGVYDRWPLRDSPEFHVARAEVDYKAPILLDEEIDI
CVRAARVGKSSMTFLFELHGKGKDELRAAGTIVNVHVEEAQGATAPVPDEFVSLFEAFEGRPLRA
>Mature_144_residues
ARSDFRFHVTKRVRYAEIDAQAVVFNSRYLEYFDLGITEYWRAAGVYDRWPLRDSPEFHVARAEVDYKAPILLDEEIDIC
VRAARVGKSSMTFLFELHGKGKDELRAAGTIVNVHVEEAQGATAPVPDEFVSLFEAFEGRPLRA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16571; Mature: 16440

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSDFRFHVTKRVRYAEIDAQAVVFNSRYLEYFDLGITEYWRAAGVYDRWPLRDSPEFH
CCCCCEEEEEECCEEEEECCCEEEEECCCCEEEHHCCHHHHHHHCCCCCCCCCCCCCCEE
VARAEVDYKAPILLDEEIDICVRAARVGKSSMTFLFELHGKGKDELRAAGTIVNVHVEEA
EEEEECCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCEEEEEEEECC
QGATAPVPDEFVSLFEAFEGRPLRA
CCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARSDFRFHVTKRVRYAEIDAQAVVFNSRYLEYFDLGITEYWRAAGVYDRWPLRDSPEFH
CCCCEEEEEECCEEEEECCCEEEEECCCCEEEHHCCHHHHHHHCCCCCCCCCCCCCCEE
VARAEVDYKAPILLDEEIDICVRAARVGKSSMTFLFELHGKGKDELRAAGTIVNVHVEEA
EEEEECCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCEEEEEEEECC
QGATAPVPDEFVSLFEAFEGRPLRA
CCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA