Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486180

Identifier: 103486180

GI number: 103486180

Start: 695706

End: 696470

Strand: Reverse

Name: 103486180

Synonym: Sala_0687

Alternate gene names: NA

Gene position: 696470-695706 (Counterclockwise)

Preceding gene: 103486181

Following gene: 103486179

Centisome position: 20.82

GC content: 69.54

Gene sequence:

>765_bases
TTGTCCGAACCCTCCGCCACTCATTATCTCGACCGCACAGGCCGCCCACGGCTCGCCTATCGTTTCACGCCCGGCGCGGG
GCCGACGATCGTCTTCCTGCCCGGCTATATGTCCGACATGGCGGGGGGCAAGGCGACCGCGCTGTTCGATTGGGCCGCCG
CCGAAGCGCGCGCGTGCCTGTTGCTCGACTATGCCGGGTGCGGGCTGTCGGACGGGCTGTTCGCCGAGCAGACCTTGCTC
GACTGGCGCGGCGATGTGCTCGACCTGATCGATGCGAAGGTCGATGGCCCCGTCATCCTCGTCGGCTCGTCGATGGGCGG
CTGGCTGATGCTGCTCACCGCGCTCGCGATCGTCCGGCGCGACGGGCCGGGCCGCGTCGCGGGGCTGGTCGGCATCGCGG
CGGCGCCCGACTTCACCGACTGGGGCTTCACGCCCGAGGAAAAGGCGATCATCCTTGCCGAAGGTGCGCTGGTCGAGGAG
ACGCCCTATGGCGACCAGCCTTATGTGACGACGCGCGGCTTTTTCCGGTCGGGCGAGGCGAACCGGCTGCTCGACGCCGA
AATCCCCCTCACCTGCCCTGTCCGCCTGCTCCACGGGCAGGAGGATGGCGACGTTCCGCCCGACATCAGCCTGCGCCTGG
CGGCGGCGCTCGCGAGCGACGATGTGCAGGTCACGCTCGTCAAGGGCGGCGATCACCGCCTGTCGCGCGACACCGACATC
GCGCTGCTGATCGACACGGTCGCGCGCTTGGCGGCCGGAAACTAA

Upstream 100 bases:

>100_bases
AATTCCGTTCGCATCGAGCGAAGTCGAGATGCTCATCGGTCATTCACGCCTTCGGGGTGTCTCGACTTCGCTCGACACGA
ACGGGAATAGGAGGCCCTTT

Downstream 100 bases:

>100_bases
AGCTTGATTGAAAAAGCCTCGTTCCCCCGCGAAGGCGAGGGCACGGCTTTTCCATTCACCGATGTCCGAGGATGTTCATG
GCTCGCAGCGACTTTCGTTT

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSEPSATHYLDRTGRPRLAYRFTPGAGPTIVFLPGYMSDMAGGKATALFDWAAAEARACLLLDYAGCGLSDGLFAEQTLL
DWRGDVLDLIDAKVDGPVILVGSSMGGWLMLLTALAIVRRDGPGRVAGLVGIAAAPDFTDWGFTPEEKAIILAEGALVEE
TPYGDQPYVTTRGFFRSGEANRLLDAEIPLTCPVRLLHGQEDGDVPPDISLRLAAALASDDVQVTLVKGGDHRLSRDTDI
ALLIDTVARLAAGN

Sequences:

>Translated_254_residues
MSEPSATHYLDRTGRPRLAYRFTPGAGPTIVFLPGYMSDMAGGKATALFDWAAAEARACLLLDYAGCGLSDGLFAEQTLL
DWRGDVLDLIDAKVDGPVILVGSSMGGWLMLLTALAIVRRDGPGRVAGLVGIAAAPDFTDWGFTPEEKAIILAEGALVEE
TPYGDQPYVTTRGFFRSGEANRLLDAEIPLTCPVRLLHGQEDGDVPPDISLRLAAALASDDVQVTLVKGGDHRLSRDTDI
ALLIDTVARLAAGN
>Mature_253_residues
SEPSATHYLDRTGRPRLAYRFTPGAGPTIVFLPGYMSDMAGGKATALFDWAAAEARACLLLDYAGCGLSDGLFAEQTLLD
WRGDVLDLIDAKVDGPVILVGSSMGGWLMLLTALAIVRRDGPGRVAGLVGIAAAPDFTDWGFTPEEKAIILAEGALVEET
PYGDQPYVTTRGFFRSGEANRLLDAEIPLTCPVRLLHGQEDGDVPPDISLRLAAALASDDVQVTLVKGGDHRLSRDTDIA
LLIDTVARLAAGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923001, Length=249, Percent_Identity=40.5622489959839, Blast_Score=179, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26954; Mature: 26823

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPSATHYLDRTGRPRLAYRFTPGAGPTIVFLPGYMSDMAGGKATALFDWAAAEARACL
CCCCCCCHHHCCCCCCEEEEEECCCCCCEEEECCCHHHHHCCCCEEEEEEHHHHCCCEEE
LLDYAGCGLSDGLFAEQTLLDWRGDVLDLIDAKVDGPVILVGSSMGGWLMLLTALAIVRR
EEEECCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC
DGPGRVAGLVGIAAAPDFTDWGFTPEEKAIILAEGALVEETPYGDQPYVTTRGFFRSGEA
CCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCEEEECCEEECCCC
NRLLDAEIPLTCPVRLLHGQEDGDVPPDISLRLAAALASDDVQVTLVKGGDHRLSRDTDI
CEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCH
ALLIDTVARLAAGN
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SEPSATHYLDRTGRPRLAYRFTPGAGPTIVFLPGYMSDMAGGKATALFDWAAAEARACL
CCCCCCHHHCCCCCCEEEEEECCCCCCEEEECCCHHHHHCCCCEEEEEEHHHHCCCEEE
LLDYAGCGLSDGLFAEQTLLDWRGDVLDLIDAKVDGPVILVGSSMGGWLMLLTALAIVRR
EEEECCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC
DGPGRVAGLVGIAAAPDFTDWGFTPEEKAIILAEGALVEETPYGDQPYVTTRGFFRSGEA
CCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCEEEECCEEECCCC
NRLLDAEIPLTCPVRLLHGQEDGDVPPDISLRLAAALASDDVQVTLVKGGDHRLSRDTDI
CEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCH
ALLIDTVARLAAGN
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA