Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103485766

Identifier: 103485766

GI number: 103485766

Start: 270915

End: 271136

Strand: Reverse

Name: 103485766

Synonym: Sala_0271

Alternate gene names: NA

Gene position: 271136-270915 (Counterclockwise)

Preceding gene: 103485767

Following gene: 103485765

Centisome position: 8.11

GC content: 56.76

Gene sequence:

>222_bases
ATGCAGCCCCGCTATCACATTAATGTTTTCTGGTATCCCGACGACAATTGCTGGATAGCTGATGTTCCCGACTTGCGCCC
TTGCTCGGCGCATGGCGAGACGCCAATTGAAGCCGTTGCGGAAGCTGAAATCGCGATCGAAAGCTGGCTTGAGGTTGCGC
GGGAGAAAGGCTTTCCGATCCCCGAACCCCGTTATCGCCCGGCGATCTACGCTGTGAGGTAG

Upstream 100 bases:

>100_bases
GCGAGGGTTTTTTTCTCGGCCTTCAGATCGACTATGATCTGGAGGAAGAACGCCGGGAACACGGGGCTGACTTGGACAAG
ATCGTCCGTCGTGCCGCCTG

Downstream 100 bases:

>100_bases
GCGATAGGCGTCATCCGCCTGACCCCTTCGAACAAAACCCCACTGCAACCGACCAGCACCCTTGCCCCCTCCCCGCGCGC
GGCTTAGCGTCCGTGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPIPEPRYRPAIYAVR

Sequences:

>Translated_73_residues
MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPIPEPRYRPAIYAVR
>Mature_73_residues
MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPIPEPRYRPAIYAVR

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8468; Mature: 8468

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPI
CCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PEPRYRPAIYAVR
CCCCCCCEEEEEC
>Mature Secondary Structure
MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPI
CCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PEPRYRPAIYAVR
CCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA