| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485766
Identifier: 103485766
GI number: 103485766
Start: 270915
End: 271136
Strand: Reverse
Name: 103485766
Synonym: Sala_0271
Alternate gene names: NA
Gene position: 271136-270915 (Counterclockwise)
Preceding gene: 103485767
Following gene: 103485765
Centisome position: 8.11
GC content: 56.76
Gene sequence:
>222_bases ATGCAGCCCCGCTATCACATTAATGTTTTCTGGTATCCCGACGACAATTGCTGGATAGCTGATGTTCCCGACTTGCGCCC TTGCTCGGCGCATGGCGAGACGCCAATTGAAGCCGTTGCGGAAGCTGAAATCGCGATCGAAAGCTGGCTTGAGGTTGCGC GGGAGAAAGGCTTTCCGATCCCCGAACCCCGTTATCGCCCGGCGATCTACGCTGTGAGGTAG
Upstream 100 bases:
>100_bases GCGAGGGTTTTTTTCTCGGCCTTCAGATCGACTATGATCTGGAGGAAGAACGCCGGGAACACGGGGCTGACTTGGACAAG ATCGTCCGTCGTGCCGCCTG
Downstream 100 bases:
>100_bases GCGATAGGCGTCATCCGCCTGACCCCTTCGAACAAAACCCCACTGCAACCGACCAGCACCCTTGCCCCCTCCCCGCGCGC GGCTTAGCGTCCGTGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPIPEPRYRPAIYAVR
Sequences:
>Translated_73_residues MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPIPEPRYRPAIYAVR >Mature_73_residues MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPIPEPRYRPAIYAVR
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8468; Mature: 8468
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPI CCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC PEPRYRPAIYAVR CCCCCCCEEEEEC >Mature Secondary Structure MQPRYHINVFWYPDDNCWIADVPDLRPCSAHGETPIEAVAEAEIAIESWLEVAREKGFPI CCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC PEPRYRPAIYAVR CCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA