| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485767
Identifier: 103485767
GI number: 103485767
Start: 271136
End: 271456
Strand: Reverse
Name: 103485767
Synonym: Sala_0272
Alternate gene names: NA
Gene position: 271456-271136 (Counterclockwise)
Preceding gene: 103485768
Following gene: 103485766
Centisome position: 8.11
GC content: 57.01
Gene sequence:
>321_bases ATGTCCGGATCGAGGACTATCACCGAGGATGACGACCGGCTGGACAATGTCCATCCCGGCGACATTCTGCGCCACGATTT CCTGATCGGCAGCGACATCGCCATTTCTGAGGTTGCTGATGGAGCCGGAATCGCCGTTGAACATCTCGAAGCCATTCTGG ATGCCCGGCAAGCAATCGACGCCAATGTTGATCTGCGACTGGCGCGCTACTTCGGAATGAGCGAGGGTTTTTTTCTCGGC CTTCAGATCGACTATGATCTGGAGGAAGAACGCCGGGAACACGGGGCTGACTTGGACAAGATCGTCCGTCGTGCCGCCTG A
Upstream 100 bases:
>100_bases CGACTGGAACAGTTGAAAGGCTTCACACCTTTACGATATAGTCTGCGGATCAACGACCAGTGGCGGATCACCTTCCATTG GTCGAACGGAGGCGCTGACG
Downstream 100 bases:
>100_bases TGCAGCCCCGCTATCACATTAATGTTTTCTGGTATCCCGACGACAATTGCTGGATAGCTGATGTTCCCGACTTGCGCCCT TGCTCGGCGCATGGCGAGAC
Product: XRE family plasmid maintenance system antidote protein
Products: NA
Alternate protein names: Plasmid Maintenance System Antidote Protein XRE Family; Plasmid Maintenance System Antidote Protein; Addiction Module Antidote Protein HigA Family; Plasmid Maintenance System Antidote Protein Xre Family
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSGSRTITEDDDRLDNVHPGDILRHDFLIGSDIAISEVADGAGIAVEHLEAILDARQAIDANVDLRLARYFGMSEGFFLG LQIDYDLEEERREHGADLDKIVRRAA
Sequences:
>Translated_106_residues MSGSRTITEDDDRLDNVHPGDILRHDFLIGSDIAISEVADGAGIAVEHLEAILDARQAIDANVDLRLARYFGMSEGFFLG LQIDYDLEEERREHGADLDKIVRRAA >Mature_105_residues SGSRTITEDDDRLDNVHPGDILRHDFLIGSDIAISEVADGAGIAVEHLEAILDARQAIDANVDLRLARYFGMSEGFFLGL QIDYDLEEERREHGADLDKIVRRAA
Specific function: Unknown
COG id: COG3093
COG function: function code R; Plasmid maintenance system antidote protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11780; Mature: 11649
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSRTITEDDDRLDNVHPGDILRHDFLIGSDIAISEVADGAGIAVEHLEAILDARQAID CCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCC ANVDLRLARYFGMSEGFFLGLQIDYDLEEERREHGADLDKIVRRAA CCCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure SGSRTITEDDDRLDNVHPGDILRHDFLIGSDIAISEVADGAGIAVEHLEAILDARQAID CCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCC ANVDLRLARYFGMSEGFFLGLQIDYDLEEERREHGADLDKIVRRAA CCCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA