| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is grxC [H]
Identifier: 103485623
GI number: 103485623
Start: 122968
End: 123243
Strand: Direct
Name: grxC [H]
Synonym: Sala_0127
Alternate gene names: 103485623
Gene position: 122968-123243 (Clockwise)
Preceding gene: 103485622
Following gene: 103485629
Centisome position: 3.68
GC content: 57.97
Gene sequence:
>276_bases ATGAAACCGAACATAACCCTCTATACCAAGGACTATTGCCCCTTTTGTCACCGGGCCAAGGCGCATCTTCGCGCCAAGGG GGTGACCGACTGGATCGAAATCGACGTCGAAGATGATCCGGTGCAGTTCCGTGCAATGCAGACAGCGTCTGGTGGACGCA GGACGGTTCCGCAGATCTTCATCAACGGTACGCATGTGGGCGGGTCGGATGATCTGGTGGCGCTCGATGCCGACGGCGGC CTCGATTTGCTGCTGCGCGAAAAGATGCTCGTCTGA
Upstream 100 bases:
>100_bases GAGCGCCGTCCCAATGGTTACACCTGCCACTTTCCGCGCGCCGCCTGGGTCCTTCCATCGGCCGGCGAGCGGTCTGAGGC AGCTTGATCGGAGACATGAA
Downstream 100 bases:
>100_bases AACTAACGGGCGTCCGCCGAACAGCGGGCGCCCGTTTGCGCGTTACCGTGAGCCGCCCCGGAGTTGCTCGCGCTTAGAGC CAACGGCGATCGGCCGTGAA
Product: glutaredoxin GrxC
Products: NA
Alternate protein names: Grx3 [H]
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MKPNITLYTKDYCPFCHRAKAHLRAKGVTDWIEIDVEDDPVQFRAMQTASGGRRTVPQIFINGTHVGGSDDLVALDADGG LDLLLREKMLV
Sequences:
>Translated_91_residues MKPNITLYTKDYCPFCHRAKAHLRAKGVTDWIEIDVEDDPVQFRAMQTASGGRRTVPQIFINGTHVGGSDDLVALDADGG LDLLLREKMLV >Mature_91_residues MKPNITLYTKDYCPFCHRAKAHLRAKGVTDWIEIDVEDDPVQFRAMQTASGGRRTVPQIFINGTHVGGSDDLVALDADGG LDLLLREKMLV
Specific function: The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing some disulfides in a coupled system with glutathione re
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790039, Length=83, Percent_Identity=53.0120481927711, Blast_Score=88, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17509845, Length=87, Percent_Identity=39.0804597701149, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011900 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 10114; Mature: 10114
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNITLYTKDYCPFCHRAKAHLRAKGVTDWIEIDVEDDPVQFRAMQTASGGRRTVPQIF CCCCEEEEECCCCCCHHHCCHHEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEE INGTHVGGSDDLVALDADGGLDLLLREKMLV EECEEECCCCCEEEEECCCCEEEEEECCCCC >Mature Secondary Structure MKPNITLYTKDYCPFCHRAKAHLRAKGVTDWIEIDVEDDPVQFRAMQTASGGRRTVPQIF CCCCEEEEECCCCCCHHHCCHHEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEE INGTHVGGSDDLVALDADGGLDLLLREKMLV EECEEECCCCCEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]