Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485629

Identifier: 103485629

GI number: 103485629

Start: 128017

End: 128427

Strand: Direct

Name: 103485629

Synonym: Sala_0133

Alternate gene names: NA

Gene position: 128017-128427 (Clockwise)

Preceding gene: 103485623

Following gene: 103485631

Centisome position: 3.83

GC content: 61.07

Gene sequence:

>411_bases
ATGGCGCGACCGGGCGCTCGCTATCGAATTCTGGATTGCGACCGCGTTGATGGGTGGCTCATTCCTCGTCGGGGCATGGC
AGGCGCTCAAATATTTGTTCTAGCGGTGCAGGTGGTGCAGTGGGGCTACGCGCCGGCCGCCAGCGGCGAAGAAGCAATAT
TCTCGGGAGCCACACCGTCGACATCGACCAGGTCTTCACCGACCACGATGCCGGTAATGCGAACACGCTTTTCGATATGG
TCGACCGGAACGCGGTGGAGGTCGAGGCGCCACCGACCGCCAAGGTCACGGCGAAGCGAGAATCCGCCCGCGTCGCGGAG
CAAGGTTCCCGTCTCTTCGATTCTCGTGCCGATCATCATCATGTCGTTGGCCTACCCAAAGTCGCAACACCGCGCCAGAA
ACTTTGGATGA

Upstream 100 bases:

>100_bases
GCCTATTCCGTAGGATTTTGTCGCCACCAAGCGTGGATTAATCGCTTTCCTACAATATTTCGCGCTGTCATGCCGAGCCT
ATGCAAGTACGCGGAACCAA

Downstream 100 bases:

>100_bases
AGGCCTTTCAACCCAGCCTAAATGCTCAGCGCCGCCGAAATGGCTCGCAAGCCACCCCGTCACCGTCGCCATCCATTTCT
GGCCGATATCCCGGCTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MARPGARYRILDCDRVDGWLIPRRGMAGAQIFVLAVQVVQWGYAPAASGEEAIFSGATPSTSTRSSPTTMPVMRTRFSIW
STGTRWRSRRHRPPRSRRSENPPASRSKVPVSSILVPIIIMSLAYPKSQHRARNFG

Sequences:

>Translated_136_residues
MARPGARYRILDCDRVDGWLIPRRGMAGAQIFVLAVQVVQWGYAPAASGEEAIFSGATPSTSTRSSPTTMPVMRTRFSIW
STGTRWRSRRHRPPRSRRSENPPASRSKVPVSSILVPIIIMSLAYPKSQHRARNFG
>Mature_135_residues
ARPGARYRILDCDRVDGWLIPRRGMAGAQIFVLAVQVVQWGYAPAASGEEAIFSGATPSTSTRSSPTTMPVMRTRFSIWS
TGTRWRSRRHRPPRSRRSENPPASRSKVPVSSILVPIIIMSLAYPKSQHRARNFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15194; Mature: 15063

Theoretical pI: Translated: 12.42; Mature: 12.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPGARYRILDCDRVDGWLIPRRGMAGAQIFVLAVQVVQWGYAPAASGEEAIFSGATPS
CCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
TSTRSSPTTMPVMRTRFSIWSTGTRWRSRRHRPPRSRRSENPPASRSKVPVSSILVPIII
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
MSLAYPKSQHRARNFG
HHHCCCCHHHHCCCCC
>Mature Secondary Structure 
ARPGARYRILDCDRVDGWLIPRRGMAGAQIFVLAVQVVQWGYAPAASGEEAIFSGATPS
CCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
TSTRSSPTTMPVMRTRFSIWSTGTRWRSRRHRPPRSRRSENPPASRSKVPVSSILVPIII
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
MSLAYPKSQHRARNFG
HHHCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA