| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is msrA2 [H]
Identifier: 103485622
GI number: 103485622
Start: 122439
End: 122954
Strand: Direct
Name: msrA2 [H]
Synonym: Sala_0126
Alternate gene names: 103485622
Gene position: 122439-122954 (Clockwise)
Preceding gene: 103485621
Following gene: 103485623
Centisome position: 3.66
GC content: 63.57
Gene sequence:
>516_bases ATGACCGAACGTTCCATCCTTGCCGGCGGCTGCTTCTGGGGCATGCAGGACCTGATCCGCAAACTCCCCGGCGTCGTCAG CACCCGTGTCGGTTACAGCGGCGGCGATGTGCCGAACGCGACCTATCGCAACCACGGCACGCACGCCGAGGCGATCGAGA TCAATTTCGATCCCGATCAGATCAGCTACCGCCGGATCCTCGAATTTTTCTTCCAGATCCACGATCCGACCACGCGCAAT CGCCAGGGCAACGACCGCGGCGGGAGCTATCGCTCGGCGATCTATTATGCCGACGAAGCGCAGCGTGAAACCGCGTTGCA GACGATCGCGGACGTCAACGCATCCGGCCTCTGGCCGGGAAAGGTAGCGAGCGAGTTGGAGCCGATTGGCCCCTTCTGGG AGGCGGAGCCGGAGCACCAGGATTATCTGGAGCGCCGTCCCAATGGTTACACCTGCCACTTTCCGCGCGCCGCCTGGGTC CTTCCATCGGCCGGCGAGCGGTCTGAGGCAGCTTGA
Upstream 100 bases:
>100_bases GCTACTGCATCAACTCGGCTTCACTCCGCTTCGTCCACCGCGATGACATGGAAGCCGAGGGCTATTCCGAATTTCTGAAC CAGATCGAGGAGAATTGATC
Downstream 100 bases:
>100_bases TCGGAGACATGAAATGAAACCGAACATAACCCTCTATACCAAGGACTATTGCCCCTTTTGTCACCGGGCCAAGGCGCATC TTCGCGCCAAGGGGGTGACC
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTERSILAGGCFWGMQDLIRKLPGVVSTRVGYSGGDVPNATYRNHGTHAEAIEINFDPDQISYRRILEFFFQIHDPTTRN RQGNDRGGSYRSAIYYADEAQRETALQTIADVNASGLWPGKVASELEPIGPFWEAEPEHQDYLERRPNGYTCHFPRAAWV LPSAGERSEAA
Sequences:
>Translated_171_residues MTERSILAGGCFWGMQDLIRKLPGVVSTRVGYSGGDVPNATYRNHGTHAEAIEINFDPDQISYRRILEFFFQIHDPTTRN RQGNDRGGSYRSAIYYADEAQRETALQTIADVNASGLWPGKVASELEPIGPFWEAEPEHQDYLERRPNGYTCHFPRAAWV LPSAGERSEAA >Mature_170_residues TERSILAGGCFWGMQDLIRKLPGVVSTRVGYSGGDVPNATYRNHGTHAEAIEINFDPDQISYRRILEFFFQIHDPTTRNR QGNDRGGSYRSAIYYADEAQRETALQTIADVNASGLWPGKVASELEPIGPFWEAEPEHQDYLERRPNGYTCHFPRAAWVL PSAGERSEAA
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI208609995, Length=157, Percent_Identity=36.9426751592357, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI6912516, Length=157, Percent_Identity=36.9426751592357, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=37.3831775700935, Blast_Score=78, Evalue=3e-15, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=42.7631578947368, Blast_Score=119, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17533973, Length=146, Percent_Identity=38.3561643835616, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6320881, Length=166, Percent_Identity=36.7469879518072, Blast_Score=110, Evalue=1e-25, Organism=Drosophila melanogaster, GI24664627, Length=142, Percent_Identity=35.9154929577465, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI45553131, Length=142, Percent_Identity=35.9154929577465, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24664631, Length=144, Percent_Identity=34.7222222222222, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 19205; Mature: 19074
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERSILAGGCFWGMQDLIRKLPGVVSTRVGYSGGDVPNATYRNHGTHAEAIEINFDPDQ CCCCCEECCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH ISYRRILEFFFQIHDPTTRNRQGNDRGGSYRSAIYYADEAQRETALQTIADVNASGLWPG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCC KVASELEPIGPFWEAEPEHQDYLERRPNGYTCHFPRAAWVLPSAGERSEAA HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCC >Mature Secondary Structure TERSILAGGCFWGMQDLIRKLPGVVSTRVGYSGGDVPNATYRNHGTHAEAIEINFDPDQ CCCCEECCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH ISYRRILEFFFQIHDPTTRNRQGNDRGGSYRSAIYYADEAQRETALQTIADVNASGLWPG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCC KVASELEPIGPFWEAEPEHQDYLERRPNGYTCHFPRAAWVLPSAGERSEAA HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]