Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yuiH [H]

Identifier: 103485605

GI number: 103485605

Start: 107168

End: 107773

Strand: Direct

Name: yuiH [H]

Synonym: Sala_0108

Alternate gene names: 103485605

Gene position: 107168-107773 (Clockwise)

Preceding gene: 103485597

Following gene: 103485606

Centisome position: 3.2

GC content: 59.08

Gene sequence:

>606_bases
ATGGTCACCAGAGGTTTCACCGGTCGCGGTTCAAGTGGCGACCAGTCCGGCCGGATTCCGCCGGGTCAGCATCTCGTGGA
GAATTTTCCGGTTCTCACGGCGGGGCCGACGCCGAACGTGGAGCTGGCTGATTGGAAATTCACCGTCAAAGTCGGCCCGA
AGCCGGTCAAAGTGTGGAACTGGAGCGAGTTTAACGCCCTGCCAAAGACCAAGGTGACCAAGGATATTCACTGTGTGACC
TCTTGGTCCAAGCTGGATACCATATGGGAGGGCGTCCTCATTGAAGACATCCTTGCGGATGCAGGGCTCGACCGGCCCAC
TGATTTCGTCCTGGCGCATTCCTACGACGATTATTCGACAAACGTCCCGCTGGCGGACCTGCTGTCCGGGAAAGCGATGG
TCGCTCTCAAATTTGCCGGCCAGCCGATTACCCGCGATCATGGCGGGCCGGCGCGTCTGCTGGTTCCGCATCTGTACTTC
TGGAAGTCCGCCAAATGGGTGAAGGCGCTGCAATTCACAACCCGTGACGAGGCCGGCTTCTGGGAGCTGCGCGGCTATCA
TATTTACGGCGATCCGTGGCGCGAGCAACGATACACCGATGACTGA

Upstream 100 bases:

>100_bases
CGTTTCAGGCTTCAAGCCATCGGTTCGTACCGCGGCCACGCGTATCAGGTCTGAAGTGAAGCCGGTTATCGTCTGTCGCA
TCGAGCAAAAAGGGGGCACT

Downstream 100 bases:

>100_bases
CAACGGCACGCAAACCGCGTCATGGCAATCATGCGTGATCGAGGAAATCGTCCAGCAGACGCCGAGCATCAAAAGCTTCT
TCCTCCGATTGAGCAGGCCG

Product: oxidoreductase, molybdopterin binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVTRGFTGRGSSGDQSGRIPPGQHLVENFPVLTAGPTPNVELADWKFTVKVGPKPVKVWNWSEFNALPKTKVTKDIHCVT
SWSKLDTIWEGVLIEDILADAGLDRPTDFVLAHSYDDYSTNVPLADLLSGKAMVALKFAGQPITRDHGGPARLLVPHLYF
WKSAKWVKALQFTTRDEAGFWELRGYHIYGDPWREQRYTDD

Sequences:

>Translated_201_residues
MVTRGFTGRGSSGDQSGRIPPGQHLVENFPVLTAGPTPNVELADWKFTVKVGPKPVKVWNWSEFNALPKTKVTKDIHCVT
SWSKLDTIWEGVLIEDILADAGLDRPTDFVLAHSYDDYSTNVPLADLLSGKAMVALKFAGQPITRDHGGPARLLVPHLYF
WKSAKWVKALQFTTRDEAGFWELRGYHIYGDPWREQRYTDD
>Mature_201_residues
MVTRGFTGRGSSGDQSGRIPPGQHLVENFPVLTAGPTPNVELADWKFTVKVGPKPVKVWNWSEFNALPKTKVTKDIHCVT
SWSKLDTIWEGVLIEDILADAGLDRPTDFVLAHSYDDYSTNVPLADLLSGKAMVALKFAGQPITRDHGGPARLLVPHLYF
WKSAKWVKALQFTTRDEAGFWELRGYHIYGDPWREQRYTDD

Specific function: Unknown

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 22627; Mature: 22627

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTRGFTGRGSSGDQSGRIPPGQHLVENFPVLTAGPTPNVELADWKFTVKVGPKPVKVWN
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCEEECEEEEEEECCCEEEEEC
WSEFNALPKTKVTKDIHCVTSWSKLDTIWEGVLIEDILADAGLDRPTDFVLAHSYDDYST
CHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
NVPLADLLSGKAMVALKFAGQPITRDHGGPARLLVPHLYFWKSAKWVKALQFTTRDEAGF
CCCHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHCCCCHHEEEEECCCCCCCE
WELRGYHIYGDPWREQRYTDD
EEEEEEEEECCCHHCCCCCCC
>Mature Secondary Structure
MVTRGFTGRGSSGDQSGRIPPGQHLVENFPVLTAGPTPNVELADWKFTVKVGPKPVKVWN
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCEEECEEEEEEECCCEEEEEC
WSEFNALPKTKVTKDIHCVTSWSKLDTIWEGVLIEDILADAGLDRPTDFVLAHSYDDYST
CHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
NVPLADLLSGKAMVALKFAGQPITRDHGGPARLLVPHLYFWKSAKWVKALQFTTRDEAGF
CCCHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHHHCCCCHHEEEEECCCCCCCE
WELRGYHIYGDPWREQRYTDD
EEEEEEEEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]