Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485597

Identifier: 103485597

GI number: 103485597

Start: 101928

End: 102380

Strand: Direct

Name: 103485597

Synonym: Sala_0100

Alternate gene names: NA

Gene position: 101928-102380 (Clockwise)

Preceding gene: 103485596

Following gene: 103485605

Centisome position: 3.05

GC content: 55.19

Gene sequence:

>453_bases
ATGATGAACTGGAATAAAAGCCACATCCGCGAAACCATGCTTTCGCTGGAGACTGCCGCCCTGCATAGCGCTCGCACCAA
TTATCTGGATTATGTCTCCATCGCTCAGCTGGATCGGAGCGAGCCGATCGAGAATGACGAGCAGGCGCAGGCCGAAGTCG
CGAGCGACTTGGCTGAAGCGCTTGACGACACATTGCACGACTATGCCGATAAACTTGAAAAGCTCAGGACGATCGACTTC
GGCCCCAAGTCGGCAGTGGAGGAGGGTGCTGTCATCAAACTGTCGGGGCGCCATTTCGTGATCGCAGTGTCAACGAGCAA
GTTCACCTGTGATGGGCGTGAGTTCATGGGAATTTCAACGATGGCGCCGATCTTCGAGGCGATCGAAGGAGCACGAACAG
GAGAGACCGTGCAGTTCAACGGCCGGGACCTCATCGTAGAAGATGTAGAATAG

Upstream 100 bases:

>100_bases
CCAGGCGACGAGTAGCGGGCCGGCGAGCCCAATGGGGGCACTCCCGCGGCGGTGACGGACCGAAGCACGAACTTTCGAAT
GATCCAAACACAACGAGGTG

Downstream 100 bases:

>100_bases
GACGCCCGTCGCAGTAGGCGCGCTAGTGCCGGGCGGCCTCCGTCTCTGACTCCATGCATATCATCACATCAAGAGATCCC
GTGATCATCGGTGTGCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MMNWNKSHIRETMLSLETAALHSARTNYLDYVSIAQLDRSEPIENDEQAQAEVASDLAEALDDTLHDYADKLEKLRTIDF
GPKSAVEEGAVIKLSGRHFVIAVSTSKFTCDGREFMGISTMAPIFEAIEGARTGETVQFNGRDLIVEDVE

Sequences:

>Translated_150_residues
MMNWNKSHIRETMLSLETAALHSARTNYLDYVSIAQLDRSEPIENDEQAQAEVASDLAEALDDTLHDYADKLEKLRTIDF
GPKSAVEEGAVIKLSGRHFVIAVSTSKFTCDGREFMGISTMAPIFEAIEGARTGETVQFNGRDLIVEDVE
>Mature_150_residues
MMNWNKSHIRETMLSLETAALHSARTNYLDYVSIAQLDRSEPIENDEQAQAEVASDLAEALDDTLHDYADKLEKLRTIDF
GPKSAVEEGAVIKLSGRHFVIAVSTSKFTCDGREFMGISTMAPIFEAIEGARTGETVQFNGRDLIVEDVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16669; Mature: 16669

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNWNKSHIRETMLSLETAALHSARTNYLDYVSIAQLDRSEPIENDEQAQAEVASDLAEA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDDTLHDYADKLEKLRTIDFGPKSAVEEGAVIKLSGRHFVIAVSTSKFTCDGREFMGIST
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCEEEEEEECCEEEECCCHHCCHHH
MAPIFEAIEGARTGETVQFNGRDLIVEDVE
HHHHHHHHHCCCCCCEEEECCCEEEEECCC
>Mature Secondary Structure
MMNWNKSHIRETMLSLETAALHSARTNYLDYVSIAQLDRSEPIENDEQAQAEVASDLAEA
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDDTLHDYADKLEKLRTIDFGPKSAVEEGAVIKLSGRHFVIAVSTSKFTCDGREFMGIST
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCEEEEEEECCEEEECCCHHCCHHH
MAPIFEAIEGARTGETVQFNGRDLIVEDVE
HHHHHHHHHCCCCCCEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA