| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485596
Identifier: 103485596
GI number: 103485596
Start: 101270
End: 101842
Strand: Direct
Name: 103485596
Synonym: Sala_0099
Alternate gene names: NA
Gene position: 101270-101842 (Clockwise)
Preceding gene: 103485595
Following gene: 103485597
Centisome position: 3.03
GC content: 59.86
Gene sequence:
>573_bases ATGACATCCCAAGTGACCGACGTCCTAGCAGCAGTCCAGTCCTTCGTCGCGAAGGGCTACGACCGCGAGTACCGCGTCAA GGACGGCCATCTCATCGATCTCGAACTGGGATCAACGCTCGATCCATGCGCGATAACCGTCGATGCGGCGTTGCGCCTCG AAAGCGGGGATGATGGAGAAGACGCGTCCAACATATACGCGATTACCGATCCCGCGACCAACCATAAGGGTCTGCTGATC GACGCCTTCGATGTCTTCGACGAAATCTGTCACCGCGACCTTTCCGAGCGGCTTGTCGCGGATCGGCAAACGACGCCAGC GGGCGACGAGGATGTTCCGAGCAAGCACGGCCTGCGCAAAGTCTACAAGAATGAGTTTGAGCGCGATCCCGAGCGCTATG TGCTGCGCGAGGGCTTTCCAGACTTCCCGCCATGCCCTTTCGGCGGCGCCTTCAGCATTCTCGGCTTCGATACCGCCGAG CAATCCTATGTCTGGCTTGTAACCAGCATCATCCGGGATTCCCGGCTGATCAGAGCGCCCTACCAGGGAGATGACGCCCC AGGCGACGAGTAG
Upstream 100 bases:
>100_bases ATGAATAGCGCGCGTTTGCTTTTCATCTCCGTCAGCTGAGCCGCAACAGCCTCCCTGATATTAGAGCATGTCCAATGCCA TGCAAAGCCAAGGTGCAACA
Downstream 100 bases:
>100_bases CGGGCCGGCGAGCCCAATGGGGGCACTCCCGCGGCGGTGACGGACCGAAGCACGAACTTTCGAATGATCCAAACACAACG AGGTGATGATGAACTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTSQVTDVLAAVQSFVAKGYDREYRVKDGHLIDLELGSTLDPCAITVDAALRLESGDDGEDASNIYAITDPATNHKGLLI DAFDVFDEICHRDLSERLVADRQTTPAGDEDVPSKHGLRKVYKNEFERDPERYVLREGFPDFPPCPFGGAFSILGFDTAE QSYVWLVTSIIRDSRLIRAPYQGDDAPGDE
Sequences:
>Translated_190_residues MTSQVTDVLAAVQSFVAKGYDREYRVKDGHLIDLELGSTLDPCAITVDAALRLESGDDGEDASNIYAITDPATNHKGLLI DAFDVFDEICHRDLSERLVADRQTTPAGDEDVPSKHGLRKVYKNEFERDPERYVLREGFPDFPPCPFGGAFSILGFDTAE QSYVWLVTSIIRDSRLIRAPYQGDDAPGDE >Mature_189_residues TSQVTDVLAAVQSFVAKGYDREYRVKDGHLIDLELGSTLDPCAITVDAALRLESGDDGEDASNIYAITDPATNHKGLLID AFDVFDEICHRDLSERLVADRQTTPAGDEDVPSKHGLRKVYKNEFERDPERYVLREGFPDFPPCPFGGAFSILGFDTAEQ SYVWLVTSIIRDSRLIRAPYQGDDAPGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21087; Mature: 20956
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQVTDVLAAVQSFVAKGYDREYRVKDGHLIDLELGSTLDPCAITVDAALRLESGDDGE CCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCEEEEEHEEEECCCCCCC DASNIYAITDPATNHKGLLIDAFDVFDEICHRDLSERLVADRQTTPAGDEDVPSKHGLRK CCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH VYKNEFERDPERYVLREGFPDFPPCPFGGAFSILGFDTAEQSYVWLVTSIIRDSRLIRAP HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECC YQGDDAPGDE CCCCCCCCCC >Mature Secondary Structure TSQVTDVLAAVQSFVAKGYDREYRVKDGHLIDLELGSTLDPCAITVDAALRLESGDDGE CHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCCEEEEEHEEEECCCCCCC DASNIYAITDPATNHKGLLIDAFDVFDEICHRDLSERLVADRQTTPAGDEDVPSKHGLRK CCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH VYKNEFERDPERYVLREGFPDFPPCPFGGAFSILGFDTAEQSYVWLVTSIIRDSRLIRAP HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECC YQGDDAPGDE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA