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The map label for this gene is rimP

Identifier: 99082749

GI number: 99082749

Start: 3076592

End: 3077203

Strand: Direct

Name: rimP

Synonym: TM1040_2909

Alternate gene names: 99082749

Gene position: 3076592-3077203 (Clockwise)

Preceding gene: 99082748

Following gene: 99082750

Centisome position: 96.12

GC content: 58.17

Gene sequence:

>612_bases
ATGACCAACGACCTGATTGCCAAAGCTGCGATTGACCGTCGCCTGGCCGAGATCATCACCCCGGTGATCGAGGATCTGGG
TTACGAGCTGGTCCGTATCCGGCTGATGTCTGGCAAAACCACGACGCTGCAGATCATGGCAGATCGCCCCGATGGGGGGA
TCGAGGTTGATGATTGTGCCGCGATCTCAAACGCTGTGAGCGCCACACTCGACGTCGAAGATCCGATCCTTGACGCCTAC
ACGCTTGAGGTGTCGAGCCCCGGAATTGACCGGCCGCTGACGCGTCTCAAGGACTTCGACATGTTCGAAGGCTACGAGGC
CAAGCTGGAGACCGCAGATCTCATCGACGGCCGTCGCCGCTTTAAGGGCGAGCTGGCAGGCATCGAGGACGACGAAGTAC
TCATCAATATTGAGGAACACGGCGAGACCGTGACCATCGGTCTCAAATTCGACTGGCTGAGCGATGCAAAGCTGGTGCTG
ACCGATGACCTGATCAAGGAAATGCTGCGCCAGCGGAAGGCCGCTGGTGTTCTGAACGAAGACGCCTTTGACGACATCGA
GACCGAAGGGTCCGCAGAAGGGACCACAGGGTCCGAAGAGGAGAACAAGTAA

Upstream 100 bases:

>100_bases
GTATATCCTCGCACAACAGCGGCGCGTCGGGCTCTGGTCTTGAGGCACCTTTGATTGATTTCGACGGGCCGCGGCCCGTT
TTTTTGTGTTTGGAGGTCAG

Downstream 100 bases:

>100_bases
TGGCTATCACCTCTGCAAACCAGCTGGAGCTGTTGCAAACCGCCGAGGCCGTGGCGCGTGAGAAAATGATCGATCCCGGT
CTGGTGGTCGAAGCGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCAAISNAVSATLDVEDPILDAY
TLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGELAGIEDDEVLINIEEHGETVTIGLKFDWLSDAKLVL
TDDLIKEMLRQRKAAGVLNEDAFDDIETEGSAEGTTGSEEENK

Sequences:

>Translated_203_residues
MTNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCAAISNAVSATLDVEDPILDAY
TLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGELAGIEDDEVLINIEEHGETVTIGLKFDWLSDAKLVL
TDDLIKEMLRQRKAAGVLNEDAFDDIETEGSAEGTTGSEEENK
>Mature_202_residues
TNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCAAISNAVSATLDVEDPILDAYT
LEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGELAGIEDDEVLINIEEHGETVTIGLKFDWLSDAKLVLT
DDLIKEMLRQRKAAGVLNEDAFDDIETEGSAEGTTGSEEENK

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=130, Percent_Identity=43.8461538461538, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_SILST (Q1GCH5)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_614903.1
- ProteinModelPortal:   Q1GCH5
- SMR:   Q1GCH5
- STRING:   Q1GCH5
- GeneID:   4078587
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_2909
- NMPDR:   fig|292414.1.peg.1808
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   CTVQIMA
- PhylomeDB:   Q1GCH5
- ProtClustDB:   PRK00092
- BioCyc:   SSP292414:TM1040_2909-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 22392; Mature: 22261

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCA
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEEEEEEECCCCCCCHHHHH
AISNAVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRR
HHHHHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
FKGELAGIEDDEVLINIEEHGETVTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGVLNE
HHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCC
DAFDDIETEGSAEGTTGSEEENK
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCA
CCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCEEEEEEEECCCCCCCHHHHH
AISNAVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRR
HHHHHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
FKGELAGIEDDEVLINIEEHGETVTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGVLNE
HHHHCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCC
DAFDDIETEGSAEGTTGSEEENK
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA