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The map label for this gene is ctpA [H]

Identifier: 99082595

GI number: 99082595

Start: 2903128

End: 2904465

Strand: Reverse

Name: ctpA [H]

Synonym: TM1040_2755

Alternate gene names: 99082595

Gene position: 2904465-2903128 (Counterclockwise)

Preceding gene: 99082596

Following gene: 99082587

Centisome position: 90.74

GC content: 60.54

Gene sequence:

>1338_bases
ATGAAGAAATTTGCGATGGCGGCTCTGGGCGGGACGCTTGCGGGCTTTGTGGCAACAACCTACGTGGCAGCGCCGTTGCT
GGCACAGGAGAGCAATAACACAACCGTCTATGAGCAACTCGATCTGTTTGGTGACATCTTCGAGCGCATTCGGGCGCAAT
ACGTCGAAGAGGTCGACGAAAAAGAGCTGATCGAGGCGGCGATTGGCGGCATGCTGCAGTCCCTGGATCCGCACTCTAGC
TATCTGTCCCCTGATGATGCGAGCAAGATGCGGGTGCAGACCCGTGGGGAGTTCGGTGGCCTTGGCATCGAAGTCACGCA
GGAAGACGGCTTTGTCAAAGTGGTGTCGCCGATGGATGGCACACCCGCAGACGAAGCCGGAGTCGAGGCGGGCGATTTTA
TCACCCATGTGGATGGCGAGAGCCTGTTGGGGCTTGGACTTGATGAAGCGGTCGAACTGATGCGCGGCCCGGTGGGGTCT
GAAATCATCATCACCATCGTGCGCGAAGGCGAAGACGAGCCTTTTGATGTTTCCATTATTCGCGACACCATCAAGCTGAC
GGCTGTACGCGGTCGGACCGAAGGGGACTCGGTGGTGCTGCGGGTCACGACGTTCAATGAACAGACCACGCCCAACCTCG
AGGCCAAGCTCGAAGAGCAAGTCGAGGCGCTGGGCGGCATGGACAACGTGAACGGCATCGTGCTTGACCTGCGCAACAAC
CCGGGCGGGTTGCTGACCCAGGCGATCAGCGTAGCCGACAGCTTCCTTGAAAGCGGTGAAATCGTCTCTACCCGTGGTCG
CAATCCCGAGGATGGCGAGCGGTTCAATGCAACGCCGGGGGACCTGGTTGGTGGCAAGCCGATTGTGGTGCTGATCAACG
GTGGCTCCGCCTCCGCGTCCGAGATTGTCGCCGGCGCGCTGCAAGACCACCGCCGCGCGATCGTTGTGGGCACCAAATCC
TTTGGCAAAGGGTCGGTTCAGACCGTGATGCCCCTCCGCAGCGACGGAGCCATGCGCCTCACCACCGCGCGGTATTACAC
GCCCTCTGGCCGCTCCATTCAGGCACTGGGTGTCAGCCCGGACATCGTTGTAGCGCAGCCGCGTCGCCGCCCCGAGGCTG
AGGAAGATGAACCCGCCAGCAGCGCCTTTGGTCCCCGTTCAGAGGCGGACCTGCGTGGTCGTCTGAACAATGACAGCCTC
TCCGAGGATGAGGTGCGCCAGATCGAAGCGGATCGCGAGAAGGCTGAAAAAGCCGCAGAACTGCGTGAACAGGATTATCA
GCTGGCCTACGCCATCGATATTCTGAAAGGCCTCTCGGCTCTGGGTCCTAAAGACTAA

Upstream 100 bases:

>100_bases
ACTGGTCGCTCGGAAACGCTCTATATAGAAGTCAGAATGGAAAACAGTCCCGTGGACCCTGAAACGTGGTTCCGGACAGG
GCAAGGTGGATAGGCAAGAG

Downstream 100 bases:

>100_bases
GTCAAACGCGCCTTCCAGACAGAATTCGGGCCGCCCCATCGGGCGGCCCGTTTTTTGTGCATCGTTGCGTGACGTGGCGC
GGGATCAGCCCAGCGGCTTA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKKFAMAALGGTLAGFVATTYVAAPLLAQESNNTTVYEQLDLFGDIFERIRAQYVEEVDEKELIEAAIGGMLQSLDPHSS
YLSPDDASKMRVQTRGEFGGLGIEVTQEDGFVKVVSPMDGTPADEAGVEAGDFITHVDGESLLGLGLDEAVELMRGPVGS
EIIITIVREGEDEPFDVSIIRDTIKLTAVRGRTEGDSVVLRVTTFNEQTTPNLEAKLEEQVEALGGMDNVNGIVLDLRNN
PGGLLTQAISVADSFLESGEIVSTRGRNPEDGERFNATPGDLVGGKPIVVLINGGSASASEIVAGALQDHRRAIVVGTKS
FGKGSVQTVMPLRSDGAMRLTTARYYTPSGRSIQALGVSPDIVVAQPRRRPEAEEDEPASSAFGPRSEADLRGRLNNDSL
SEDEVRQIEADREKAEKAAELREQDYQLAYAIDILKGLSALGPKD

Sequences:

>Translated_445_residues
MKKFAMAALGGTLAGFVATTYVAAPLLAQESNNTTVYEQLDLFGDIFERIRAQYVEEVDEKELIEAAIGGMLQSLDPHSS
YLSPDDASKMRVQTRGEFGGLGIEVTQEDGFVKVVSPMDGTPADEAGVEAGDFITHVDGESLLGLGLDEAVELMRGPVGS
EIIITIVREGEDEPFDVSIIRDTIKLTAVRGRTEGDSVVLRVTTFNEQTTPNLEAKLEEQVEALGGMDNVNGIVLDLRNN
PGGLLTQAISVADSFLESGEIVSTRGRNPEDGERFNATPGDLVGGKPIVVLINGGSASASEIVAGALQDHRRAIVVGTKS
FGKGSVQTVMPLRSDGAMRLTTARYYTPSGRSIQALGVSPDIVVAQPRRRPEAEEDEPASSAFGPRSEADLRGRLNNDSL
SEDEVRQIEADREKAEKAAELREQDYQLAYAIDILKGLSALGPKD
>Mature_445_residues
MKKFAMAALGGTLAGFVATTYVAAPLLAQESNNTTVYEQLDLFGDIFERIRAQYVEEVDEKELIEAAIGGMLQSLDPHSS
YLSPDDASKMRVQTRGEFGGLGIEVTQEDGFVKVVSPMDGTPADEAGVEAGDFITHVDGESLLGLGLDEAVELMRGPVGS
EIIITIVREGEDEPFDVSIIRDTIKLTAVRGRTEGDSVVLRVTTFNEQTTPNLEAKLEEQVEALGGMDNVNGIVLDLRNN
PGGLLTQAISVADSFLESGEIVSTRGRNPEDGERFNATPGDLVGGKPIVVLINGGSASASEIVAGALQDHRRAIVVGTKS
FGKGSVQTVMPLRSDGAMRLTTARYYTPSGRSIQALGVSPDIVVAQPRRRPEAEEDEPASSAFGPRSEADLRGRLNNDSL
SEDEVRQIEADREKAEKAAELREQDYQLAYAIDILKGLSALGPKD

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=338, Percent_Identity=30.7692307692308, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47637; Mature: 47637

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS50106 PDZ ; PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFAMAALGGTLAGFVATTYVAAPLLAQESNNTTVYEQLDLFGDIFERIRAQYVEEVDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
KELIEAAIGGMLQSLDPHSSYLSPDDASKMRVQTRGEFGGLGIEVTQEDGFVKVVSPMDG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCCC
TPADEAGVEAGDFITHVDGESLLGLGLDEAVELMRGPVGSEIIITIVREGEDEPFDVSII
CCCHHCCCCCCCEEEECCCCHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEHHEE
RDTIKLTAVRGRTEGDSVVLRVTTFNEQTTPNLEAKLEEQVEALGGMDNVNGIVLDLRNN
HHCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC
PGGLLTQAISVADSFLESGEIVSTRGRNPEDGERFNATPGDLVGGKPIVVLINGGSASAS
CCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
EIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLRSDGAMRLTTARYYTPSGRSIQALGVSP
HHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCC
DIVVAQPRRRPEAEEDEPASSAFGPRSEADLRGRLNNDSLSEDEVRQIEADREKAEKAAE
CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LREQDYQLAYAIDILKGLSALGPKD
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKFAMAALGGTLAGFVATTYVAAPLLAQESNNTTVYEQLDLFGDIFERIRAQYVEEVDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
KELIEAAIGGMLQSLDPHSSYLSPDDASKMRVQTRGEFGGLGIEVTQEDGFVKVVSPMDG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCCC
TPADEAGVEAGDFITHVDGESLLGLGLDEAVELMRGPVGSEIIITIVREGEDEPFDVSII
CCCHHCCCCCCCEEEECCCCHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEHHEE
RDTIKLTAVRGRTEGDSVVLRVTTFNEQTTPNLEAKLEEQVEALGGMDNVNGIVLDLRNN
HHCEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC
PGGLLTQAISVADSFLESGEIVSTRGRNPEDGERFNATPGDLVGGKPIVVLINGGSASAS
CCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
EIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLRSDGAMRLTTARYYTPSGRSIQALGVSP
HHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCC
DIVVAQPRRRPEAEEDEPASSAFGPRSEADLRGRLNNDSLSEDEVRQIEADREKAEKAAE
CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LREQDYQLAYAIDILKGLSALGPKD
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]