| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082571
Identifier: 99082571
GI number: 99082571
Start: 2874831
End: 2875316
Strand: Reverse
Name: 99082571
Synonym: TM1040_2731
Alternate gene names: NA
Gene position: 2875316-2874831 (Counterclockwise)
Preceding gene: 99082572
Following gene: 99082570
Centisome position: 89.83
GC content: 60.08
Gene sequence:
>486_bases ATGGCGCTCGACCGTTGGATCGCGCTGATCATTCTCGGCATCGCTCTGGCCTATGGCTATGCGGCCTTTTTCACCATGGA TCAGCTGCTGCCGCCGTTCATGCAGAGAAACCCGATCTGGCCGAGCACCTTCCCCAAGGTTCTGGCCGTTCTGTCAATCA TCACCGCTGCCGTGATTGTGCTGGGACTCGAAAAACCCAGTGGCGAGACCAAGACTCCGGACATCGATTACCGCCGTCTT GGGGACTACAACATCGGTCAGGCAGCGCTCTTGCTGGGGCTGATGGTCGCTTATGCGCTTTTGCTGCGCCCGGCAGGGTT CTTGCTGTCCACCTCCGGGTTCCTGATCGTGGGCGCGATGATCCTTGGCGAGCGCAAGCTCTGGGTTTTGGTGCCGGTCG CGGCCCTTGCCACCGGCATCGTCTGGTATCTCGTTGAGGGCGTGCTGGGCATCTTCTTGCGGCCCTTGCCGTTCTTTCTC GGATAA
Upstream 100 bases:
>100_bases TGGGCTTCCTCTAATCTTCGAGCAGTGACCTTAGGTCCGGCGCCACTCCCGGCGCCGGACCCTTTCCCGTACCCCCTCAC ATCAAAAACAGGAGGAGATC
Downstream 100 bases:
>100_bases TCGGAGGCTCAGATGCTCGAAGGTTTGATGATCGGCCTCTCTACGGCCTTTTCCGTTACAAACATCCTGATGGTGATCGG CGGCTGTCTGATCGGGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MALDRWIALIILGIALAYGYAAFFTMDQLLPPFMQRNPIWPSTFPKVLAVLSIITAAVIVLGLEKPSGETKTPDIDYRRL GDYNIGQAALLLGLMVAYALLLRPAGFLLSTSGFLIVGAMILGERKLWVLVPVAALATGIVWYLVEGVLGIFLRPLPFFL G
Sequences:
>Translated_161_residues MALDRWIALIILGIALAYGYAAFFTMDQLLPPFMQRNPIWPSTFPKVLAVLSIITAAVIVLGLEKPSGETKTPDIDYRRL GDYNIGQAALLLGLMVAYALLLRPAGFLLSTSGFLIVGAMILGERKLWVLVPVAALATGIVWYLVEGVLGIFLRPLPFFL G >Mature_160_residues ALDRWIALIILGIALAYGYAAFFTMDQLLPPFMQRNPIWPSTFPKVLAVLSIITAAVIVLGLEKPSGETKTPDIDYRRLG DYNIGQAALLLGLMVAYALLLRPAGFLLSTSGFLIVGAMILGERKLWVLVPVAALATGIVWYLVEGVLGIFLRPLPFFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17548; Mature: 17417
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDRWIALIILGIALAYGYAAFFTMDQLLPPFMQRNPIWPSTFPKVLAVLSIITAAVIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LGLEKPSGETKTPDIDYRRLGDYNIGQAALLLGLMVAYALLLRPAGFLLSTSGFLIVGAM HHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHH ILGERKLWVLVPVAALATGIVWYLVEGVLGIFLRPLPFFLG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALDRWIALIILGIALAYGYAAFFTMDQLLPPFMQRNPIWPSTFPKVLAVLSIITAAVIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LGLEKPSGETKTPDIDYRRLGDYNIGQAALLLGLMVAYALLLRPAGFLLSTSGFLIVGAM HHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHH ILGERKLWVLVPVAALATGIVWYLVEGVLGIFLRPLPFFLG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA