Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is tarA [H]

Identifier: 99082238

GI number: 99082238

Start: 2525684

End: 2526406

Strand: Reverse

Name: tarA [H]

Synonym: TM1040_2398

Alternate gene names: 99082238

Gene position: 2526406-2525684 (Counterclockwise)

Preceding gene: 99082247

Following gene: 99082233

Centisome position: 78.93

GC content: 60.17

Gene sequence:

>723_bases
ATGTTGAAAGCCAAAATTTCGAACAGGTTCCATGAGCGCGACGGCTTTGCGCTGGCGACGATCAATCTCGATCATTTGGT
GAAGCTGGGGCATGATCAGGCTTTTCTGACTTCGTATCAGGCGCAGGATTTTATCGTTGCGGACGGGCGCCCGATCACCT
GGCTCTCCTATCTTGCGAACCAGCCTGTCGACTTGATGCCGGGGTCCGACATGGTGACGCCGCTCGCTGAACTGGCCGCA
TCTGCCAAGGCCAAGGTGGCGCTCGTGGGCTCTTCGGAAGCCGTGTTGCAAAAAGCAGGCGCAGAGCTGAGCCGCCGTGT
GCCGGGGCTTGAGGTCGTCTATGTACGCGCGCCCAGCAGAGGGTTTGATCCGTTTGGCGCAGAGGCGCGCGGTATCCTGC
AAGACCTTGATGCCCAAGACATCGGGCTGTGTTTTATCGCCCTCGGTGCGCCCAAGCAGGAACATTTTGCCCGTCTTGGC
CGGGAGCTTGCGCCGCGCACGGGCTTTGCGTCGATTGGGGCAGGGTTGGATTTCATCGCGGGCGCTCAACGGCGTGCACC
AAGGCTAATGCGAAAACTTGCGCTCGAGTGGTTCTGGCGCATGCTGAGCAACCCGCTCCGTTTGATGCCGCGCTATATCA
AGTGCATTCTGATCCTGCCGGGCCAAGTCGTCCACGCGTTGCGCCTGCGGATGGACGCAAGCGCCGCAAGACGCGAAATC
TAG

Upstream 100 bases:

>100_bases
ATATGGTAAAAAGAAGTTTGTGCAGGCACCAAGAGAGCTGTCGGAATATGAATTTTCTGTTGATAAACAAAGCATTACGG
TCAATGTCCCGAATTGGCGC

Downstream 100 bases:

>100_bases
GTCAATCCTCTGGTCGCCACTCACCGCTGAGCGGACGGAGACCGCTCGGTCGCCGCTGGCTGGGCAGCTATTTGTACTCG
ATTAAGTCCCGCTGGCTGCC

Product: WecB/TagA/CpsF family glycosyl transferase

Products: NA

Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLKAKISNRFHERDGFALATINLDHLVKLGHDQAFLTSYQAQDFIVADGRPITWLSYLANQPVDLMPGSDMVTPLAELAA
SAKAKVALVGSSEAVLQKAGAELSRRVPGLEVVYVRAPSRGFDPFGAEARGILQDLDAQDIGLCFIALGAPKQEHFARLG
RELAPRTGFASIGAGLDFIAGAQRRAPRLMRKLALEWFWRMLSNPLRLMPRYIKCILILPGQVVHALRLRMDASAARREI

Sequences:

>Translated_240_residues
MLKAKISNRFHERDGFALATINLDHLVKLGHDQAFLTSYQAQDFIVADGRPITWLSYLANQPVDLMPGSDMVTPLAELAA
SAKAKVALVGSSEAVLQKAGAELSRRVPGLEVVYVRAPSRGFDPFGAEARGILQDLDAQDIGLCFIALGAPKQEHFARLG
RELAPRTGFASIGAGLDFIAGAQRRAPRLMRKLALEWFWRMLSNPLRLMPRYIKCILILPGQVVHALRLRMDASAARREI
>Mature_240_residues
MLKAKISNRFHERDGFALATINLDHLVKLGHDQAFLTSYQAQDFIVADGRPITWLSYLANQPVDLMPGSDMVTPLAELAA
SAKAKVALVGSSEAVLQKAGAELSRRVPGLEVVYVRAPSRGFDPFGAEARGILQDLDAQDIGLCFIALGAPKQEHFARLG
RELAPRTGFASIGAGLDFIAGAQRRAPRLMRKLALEWFWRMLSNPLRLMPRYIKCILILPGQVVHALRLRMDASAARREI

Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]

COG id: COG1922

COG function: function code M; Teichoic acid biosynthesis proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 26 family [H]

Homologues:

Organism=Escherichia coli, GI2367289, Length=195, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004629 [H]

Pfam domain/function: PF03808 Glyco_tran_WecB [H]

EC number: =2.4.1.187 [H]

Molecular weight: Translated: 26411; Mature: 26411

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAKISNRFHERDGFALATINLDHLVKLGHDQAFLTSYQAQDFIVADGRPITWLSYLAN
CCCCHHHHHHHHCCCEEEEEECHHHHHHHCCCHHHHHHHCCCEEEEECCCCHHHHHHHHC
QPVDLMPGSDMVTPLAELAASAKAKVALVGSSEAVLQKAGAELSRRVPGLEVVYVRAPSR
CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GFDPFGAEARGILQDLDAQDIGLCFIALGAPKQEHFARLGRELAPRTGFASIGAGLDFIA
CCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHH
GAQRRAPRLMRKLALEWFWRMLSNPLRLMPRYIKCILILPGQVVHALRLRMDASAARREI
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKAKISNRFHERDGFALATINLDHLVKLGHDQAFLTSYQAQDFIVADGRPITWLSYLAN
CCCCHHHHHHHHCCCEEEEEECHHHHHHHCCCHHHHHHHCCCEEEEECCCCHHHHHHHHC
QPVDLMPGSDMVTPLAELAASAKAKVALVGSSEAVLQKAGAELSRRVPGLEVVYVRAPSR
CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GFDPFGAEARGILQDLDAQDIGLCFIALGAPKQEHFARLGRELAPRTGFASIGAGLDFIA
CCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHH
GAQRRAPRLMRKLALEWFWRMLSNPLRLMPRYIKCILILPGQVVHALRLRMDASAARREI
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11882717 [H]