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The map label for this gene is amsK [H]

Identifier: 99082247

GI number: 99082247

Start: 2545320

End: 2546534

Strand: Reverse

Name: amsK [H]

Synonym: TM1040_2407

Alternate gene names: 99082247

Gene position: 2546534-2545320 (Counterclockwise)

Preceding gene: 99082249

Following gene: 99082238

Centisome position: 79.56

GC content: 62.06

Gene sequence:

>1215_bases
GTGAAAATTGCCTATGTGCTCAATACTTACCCACAACCTTCGCAGAGCTTCATTCGCCGTGAAATCCAAGCGCTCGAGCG
GCGGGGGATCACGGTGGTCCGGCTTGCGATGCGGGCGACGGATCAGGCGCTTGTGGATCCCGGTGATCAGGCGGAGGCGG
CGCAGTGCCACTATGTGCTGGCTGCGGGTGCGGCGCGTCTTGTGTTAGCACTTCTGGCTTGCGGTCTGCGCGCGCCGCTT
TCCGGCTGGCGCGCTTTCCTGTTGGCGATGCGGCTTGGAAGGGCCCAGTCCAAGCGACTGCGGCATTTGATCTATCTGTT
GGAGGCGGCTTATGTGACCCGCGTCACTGCGCGTGTGGGGTGCGCGCATCTTCACGCGCACTTCGGCACCAATGCCACAA
CGGTTGCACTTTTGGCAAATGCGCTAGGCGCACCGGGGTACAGTTTTACCACCCATGGACCCGAAGAATTCGACGCGCCG
CATGCGCTTTCGTTGGGCGAGAAAGTGGACCGCGCCCGTTTCGCCGTGGCGATTTCAAGCTTCGGGCGCAGTCAACTTAG
CCGCTGGGCGGCGTATGGCGCTTGGCCGCGTATCAAGATTGTGCATTGCGGTATCGAACCCGCGCGGTTCAGCGCCCCGG
CCCCTGTACCAGAGGGCCCGTTGCGACTGGTGGCCATCGGGCGCTTTGTGGAGCAGAAGGGACTGATGGTTCTGATCCAG
GCTCTTGCCCTAGCGGTGCGCGCGGTCCCTGACATTCATGTGTCTTTGGTTGGTGACGGCGAGATGCGCGCCGATCTGGA
AACCGCGATCAAAGCGCATGGGCTTTACGAGAATGTCACCCTCACCGGATGGCTCTCGGAGGCGGGCGTGCGCACGGCGC
TCGTGGAGTCGCACGCTTTGGTGCTGCCGTCTTTTGCCGAGGGGTTGCCGATGGTGGTGATGGAAGCCATGGCTTCCGGA
CGACCAGTGCTGGCCACCTATGTCGCCGGCACGCCCGAACTGGTTGTGCCAGATGAAACTGGCTGGATGGTGCCCGCGGG
TGATGCACAGGCCTTGGCGGATCTCATGGTAGAGGTCGCCGCATTGCCAAGAACGCAGTTTGAGCAAATGGGCCAGAAGG
CGCGTTCGCGCGTGCTCGAGCGCCACGATATCGACCGTGAAGCCGAGAAGTTGGCGCAACATTTTGCAGATGCGATCGCG
GAAAACGCTGAGTGA

Upstream 100 bases:

>100_bases
CACGGGTGTGCGCAAAAGAGCGCGCGAGGTGGTTCAGTCTGGGCAAAATCCGGTGATCCGGCTAGGTTTCAGTGCGGACC
GCGGAAAGGGATCAACCGGC

Downstream 100 bases:

>100_bases
ATGGCTTCGCTTAGCGCCCGCGCGTCCAAACCACATTTGAAGCAAACAGGTTGGTTTTCACCGCCAGTGCAACGGCAACA
TAGACTGTGGCATCGAGAGG

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKIAYVLNTYPQPSQSFIRREIQALERRGITVVRLAMRATDQALVDPGDQAEAAQCHYVLAAGAARLVLALLACGLRAPL
SGWRAFLLAMRLGRAQSKRLRHLIYLLEAAYVTRVTARVGCAHLHAHFGTNATTVALLANALGAPGYSFTTHGPEEFDAP
HALSLGEKVDRARFAVAISSFGRSQLSRWAAYGAWPRIKIVHCGIEPARFSAPAPVPEGPLRLVAIGRFVEQKGLMVLIQ
ALALAVRAVPDIHVSLVGDGEMRADLETAIKAHGLYENVTLTGWLSEAGVRTALVESHALVLPSFAEGLPMVVMEAMASG
RPVLATYVAGTPELVVPDETGWMVPAGDAQALADLMVEVAALPRTQFEQMGQKARSRVLERHDIDREAEKLAQHFADAIA
ENAE

Sequences:

>Translated_404_residues
MKIAYVLNTYPQPSQSFIRREIQALERRGITVVRLAMRATDQALVDPGDQAEAAQCHYVLAAGAARLVLALLACGLRAPL
SGWRAFLLAMRLGRAQSKRLRHLIYLLEAAYVTRVTARVGCAHLHAHFGTNATTVALLANALGAPGYSFTTHGPEEFDAP
HALSLGEKVDRARFAVAISSFGRSQLSRWAAYGAWPRIKIVHCGIEPARFSAPAPVPEGPLRLVAIGRFVEQKGLMVLIQ
ALALAVRAVPDIHVSLVGDGEMRADLETAIKAHGLYENVTLTGWLSEAGVRTALVESHALVLPSFAEGLPMVVMEAMASG
RPVLATYVAGTPELVVPDETGWMVPAGDAQALADLMVEVAALPRTQFEQMGQKARSRVLERHDIDREAEKLAQHFADAIA
ENAE
>Mature_404_residues
MKIAYVLNTYPQPSQSFIRREIQALERRGITVVRLAMRATDQALVDPGDQAEAAQCHYVLAAGAARLVLALLACGLRAPL
SGWRAFLLAMRLGRAQSKRLRHLIYLLEAAYVTRVTARVGCAHLHAHFGTNATTVALLANALGAPGYSFTTHGPEEFDAP
HALSLGEKVDRARFAVAISSFGRSQLSRWAAYGAWPRIKIVHCGIEPARFSAPAPVPEGPLRLVAIGRFVEQKGLMVLIQ
ALALAVRAVPDIHVSLVGDGEMRADLETAIKAHGLYENVTLTGWLSEAGVRTALVESHALVLPSFAEGLPMVVMEAMASG
RPVLATYVAGTPELVVPDETGWMVPAGDAQALADLMVEVAALPRTQFEQMGQKARSRVLERHDIDREAEKLAQHFADAIA
ENAE

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=272, Percent_Identity=26.1029411764706, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI1788357, Length=415, Percent_Identity=28.6746987951807, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43620; Mature: 43620

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAYVLNTYPQPSQSFIRREIQALERRGITVVRLAMRATDQALVDPGDQAEAAQCHYVL
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHH
AAGAARLVLALLACGLRAPLSGWRAFLLAMRLGRAQSKRLRHLIYLLEAAYVTRVTARVG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAHLHAHFGTNATTVALLANALGAPGYSFTTHGPEEFDAPHALSLGEKVDRARFAVAISS
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHH
FGRSQLSRWAAYGAWPRIKIVHCGIEPARFSAPAPVPEGPLRLVAIGRFVEQKGLMVLIQ
HHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHHH
ALALAVRAVPDIHVSLVGDGEMRADLETAIKAHGLYENVTLTGWLSEAGVRTALVESHAL
HHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHCCCE
VLPSFAEGLPMVVMEAMASGRPVLATYVAGTPELVVPDETGWMVPAGDAQALADLMVEVA
ECCHHHCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCEECCCCHHHHHHHHHHHH
ALPRTQFEQMGQKARSRVLERHDIDREAEKLAQHFADAIAENAE
HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIAYVLNTYPQPSQSFIRREIQALERRGITVVRLAMRATDQALVDPGDQAEAAQCHYVL
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHH
AAGAARLVLALLACGLRAPLSGWRAFLLAMRLGRAQSKRLRHLIYLLEAAYVTRVTARVG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAHLHAHFGTNATTVALLANALGAPGYSFTTHGPEEFDAPHALSLGEKVDRARFAVAISS
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHH
FGRSQLSRWAAYGAWPRIKIVHCGIEPARFSAPAPVPEGPLRLVAIGRFVEQKGLMVLIQ
HHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHHH
ALALAVRAVPDIHVSLVGDGEMRADLETAIKAHGLYENVTLTGWLSEAGVRTALVESHAL
HHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHCCCE
VLPSFAEGLPMVVMEAMASGRPVLATYVAGTPELVVPDETGWMVPAGDAQALADLMVEVA
ECCHHHCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCEECCCCHHHHHHHHHHHH
ALPRTQFEQMGQKARSRVLERHDIDREAEKLAQHFADAIAENAE
HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]