Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082156

Identifier: 99082156

GI number: 99082156

Start: 2437528

End: 2438043

Strand: Reverse

Name: 99082156

Synonym: TM1040_2316

Alternate gene names: NA

Gene position: 2438043-2437528 (Counterclockwise)

Preceding gene: 99082157

Following gene: 99082155

Centisome position: 76.17

GC content: 66.09

Gene sequence:

>516_bases
ATGATACGTTACGCACTGAAATGCGCCGAAGGGCATGGCTTTGAGAGCTGGTTTCAATCGGCGGCTGCCTACGAGAAACT
GCGCGGTGCGGGCATGGTGGCCTGCACGCTTTGCGGCTCCACCGAGGTGGAGAAGGCTTTGATGGCGCCGCGGGTGCGCC
CCGGCCGCAAGGCCGCGAGCGCCCCGGCCGGCGAAGCCGTGGCGACGCCGTCCGCCGGAAACGTTCCCTCTCAGAATCTG
CCGGCCCAGACCGCGCCTGCGGCGCCCGCGCCCACATCGCTTGCGGCACCGTCAAACGAGCTGGAAGCGGCGATTGCTGA
GCTCAAGAAGCAGGTGGAAGCCAATTCAGATTATGTGGGCAAGGATTTTGTGAAAGAGGCGCGCGACATGCATCTGGGCG
ATGCGCCTGCGCGCTCCATCCACGGAGAGGCCAAGCCCGAGGAGGCCAAGGCCCTGATCGAGGAGGGGGTGCCGGTGGTG
CCGCTGCCCTTTGCGCCCACGCGCAAGACCAACTAG

Upstream 100 bases:

>100_bases
TGGGGCGATGGGACAGTGAGGCAGGCTCCGAACACAACGGCAGCCCTTGCAAACCCCGCTCAACCGTATTTAATCGCGGC
TCCCGAGCACGAGACTGGAC

Downstream 100 bases:

>100_bases
ACGCAGGCCTCGCGCTCCAAAAGGAAGGGCGCAGGCCAAATGAGGCAGAGCAGGCAAAAGGAGACCGCCAATGCATGTGG
TCGTGACAGGCAGCAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIRYALKCAEGHGFESWFQSAAAYEKLRGAGMVACTLCGSTEVEKALMAPRVRPGRKAASAPAGEAVATPSAGNVPSQNL
PAQTAPAAPAPTSLAAPSNELEAAIAELKKQVEANSDYVGKDFVKEARDMHLGDAPARSIHGEAKPEEAKALIEEGVPVV
PLPFAPTRKTN

Sequences:

>Translated_171_residues
MIRYALKCAEGHGFESWFQSAAAYEKLRGAGMVACTLCGSTEVEKALMAPRVRPGRKAASAPAGEAVATPSAGNVPSQNL
PAQTAPAAPAPTSLAAPSNELEAAIAELKKQVEANSDYVGKDFVKEARDMHLGDAPARSIHGEAKPEEAKALIEEGVPVV
PLPFAPTRKTN
>Mature_171_residues
MIRYALKCAEGHGFESWFQSAAAYEKLRGAGMVACTLCGSTEVEKALMAPRVRPGRKAASAPAGEAVATPSAGNVPSQNL
PAQTAPAAPAPTSLAAPSNELEAAIAELKKQVEANSDYVGKDFVKEARDMHLGDAPARSIHGEAKPEEAKALIEEGVPVV
PLPFAPTRKTN

Specific function: Unknown

COG id: COG5319

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17818; Mature: 17818

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYALKCAEGHGFESWFQSAAAYEKLRGAGMVACTLCGSTEVEKALMAPRVRPGRKAAS
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCC
APAGEAVATPSAGNVPSQNLPAQTAPAAPAPTSLAAPSNELEAAIAELKKQVEANSDYVG
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
KDFVKEARDMHLGDAPARSIHGEAKPEEAKALIEEGVPVVPLPFAPTRKTN
HHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MIRYALKCAEGHGFESWFQSAAAYEKLRGAGMVACTLCGSTEVEKALMAPRVRPGRKAAS
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCC
APAGEAVATPSAGNVPSQNLPAQTAPAAPAPTSLAAPSNELEAAIAELKKQVEANSDYVG
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
KDFVKEARDMHLGDAPARSIHGEAKPEEAKALIEEGVPVVPLPFAPTRKTN
HHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA