Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082157

Identifier: 99082157

GI number: 99082157

Start: 2438318

End: 2439094

Strand: Reverse

Name: 99082157

Synonym: TM1040_2317

Alternate gene names: NA

Gene position: 2439094-2438318 (Counterclockwise)

Preceding gene: 99082158

Following gene: 99082156

Centisome position: 76.2

GC content: 65.25

Gene sequence:

>777_bases
ATGGGCGAATTGCCGGGTGAGATTCTGGAGCCAAGCGCGCGGAGCCTGTCCCTGCGCGATGTCGATGCGGAGCTTGATGC
CATTGCCGTGCGATACCGCGCGGCTGGCAGCTTTGGCATGCGGCTTTTGAATGCGCTGGGCGGTCAGGGCGAGGATTTGA
TGCGCCGCCTTCCCGCACCCGTGCAGGGCGCGATCGAGGCCGCGGTATTGCAGGCGCTGCACCTGTCGGTGCGCGGCGCC
GCGCTCAGTCGCCGCGTGGTGCCGGATCAGCCTGCAAGAACCAACCGTTGGGTCAGCACCACCATGGGGATGGTGGGCGG
CGCGGCGGGCCTGCCGGGCGCGCTGGTGGAACTGCCCGCTACAACTACCTTTCTGATGCGCAGCATTCAGGGTGTCGCGC
AGGACTATGGCTTTGACCCGAATGCCAAAAGCGTGCGCTTTGACGCGGTCGAGGTGTTTGCCGCCGCAGGCCCCATGGCG
CATGATGATGGGGCCGACACCGGGTTCTTGACCCTGCGTCTTGGGCTCTCGGGGGCGAGCCTGTCGCAGTTGATCGCCGT
TGTCGCCCCGCGTCTCGCGGTCGCGCTTGGCCCGAAACTTGCAGCGCAGATGGTGCCGGTGCTGGGTGCGGTCGCGGGGG
GCAGTGTCAATTACGTCTATTCGGGCTACTATCAGGAAATGGCGCATGTGCATTTTGCGCTGCGTCGTCTCGCGCTGGAG
GCAGATACACCCTATCCGCAGATGGTCGAGAGGTTGCAGCAGCGGCTGTTGACTTGA

Upstream 100 bases:

>100_bases
CGCAGGGGTGACAGTCTCCCCGGTTGCGACGGCATAGGTCTTGAAACCAGAGCGCGGACTCCTGATCTCATACAAAGAAG
CAACAGAGATGAGGTCATGC

Downstream 100 bases:

>100_bases
AGGCGTCACTGACGGGGGGCGTCACGCGTCATGGGGCGGAACTTCAGGAAAGGCGCGCTGAAATCATGGTAAATGAGCTG
TTAACCATTGGCCGATACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGA
ALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMA
HDDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE
ADTPYPQMVERLQQRLLT

Sequences:

>Translated_258_residues
MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGA
ALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMA
HDDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE
ADTPYPQMVERLQQRLLT
>Mature_257_residues
GELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGAA
LSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMAH
DDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALEA
DTPYPQMVERLQQRLLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27219; Mature: 27088

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAP
CCCCCCHHHCCCCCCEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC
VQGAIEAAVLQALHLSVRGAALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCC
TTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMAHDDGADTGFLTLRLGLSGAS
HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH
LSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHC
ADTPYPQMVERLQQRLLT
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAP
CCCCCHHHCCCCCCEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC
VQGAIEAAVLQALHLSVRGAALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCC
TTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMAHDDGADTGFLTLRLGLSGAS
HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH
LSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHC
ADTPYPQMVERLQQRLLT
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA