| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082157
Identifier: 99082157
GI number: 99082157
Start: 2438318
End: 2439094
Strand: Reverse
Name: 99082157
Synonym: TM1040_2317
Alternate gene names: NA
Gene position: 2439094-2438318 (Counterclockwise)
Preceding gene: 99082158
Following gene: 99082156
Centisome position: 76.2
GC content: 65.25
Gene sequence:
>777_bases ATGGGCGAATTGCCGGGTGAGATTCTGGAGCCAAGCGCGCGGAGCCTGTCCCTGCGCGATGTCGATGCGGAGCTTGATGC CATTGCCGTGCGATACCGCGCGGCTGGCAGCTTTGGCATGCGGCTTTTGAATGCGCTGGGCGGTCAGGGCGAGGATTTGA TGCGCCGCCTTCCCGCACCCGTGCAGGGCGCGATCGAGGCCGCGGTATTGCAGGCGCTGCACCTGTCGGTGCGCGGCGCC GCGCTCAGTCGCCGCGTGGTGCCGGATCAGCCTGCAAGAACCAACCGTTGGGTCAGCACCACCATGGGGATGGTGGGCGG CGCGGCGGGCCTGCCGGGCGCGCTGGTGGAACTGCCCGCTACAACTACCTTTCTGATGCGCAGCATTCAGGGTGTCGCGC AGGACTATGGCTTTGACCCGAATGCCAAAAGCGTGCGCTTTGACGCGGTCGAGGTGTTTGCCGCCGCAGGCCCCATGGCG CATGATGATGGGGCCGACACCGGGTTCTTGACCCTGCGTCTTGGGCTCTCGGGGGCGAGCCTGTCGCAGTTGATCGCCGT TGTCGCCCCGCGTCTCGCGGTCGCGCTTGGCCCGAAACTTGCAGCGCAGATGGTGCCGGTGCTGGGTGCGGTCGCGGGGG GCAGTGTCAATTACGTCTATTCGGGCTACTATCAGGAAATGGCGCATGTGCATTTTGCGCTGCGTCGTCTCGCGCTGGAG GCAGATACACCCTATCCGCAGATGGTCGAGAGGTTGCAGCAGCGGCTGTTGACTTGA
Upstream 100 bases:
>100_bases CGCAGGGGTGACAGTCTCCCCGGTTGCGACGGCATAGGTCTTGAAACCAGAGCGCGGACTCCTGATCTCATACAAAGAAG CAACAGAGATGAGGTCATGC
Downstream 100 bases:
>100_bases AGGCGTCACTGACGGGGGGCGTCACGCGTCATGGGGCGGAACTTCAGGAAAGGCGCGCTGAAATCATGGTAAATGAGCTG TTAACCATTGGCCGATACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGA ALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMA HDDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE ADTPYPQMVERLQQRLLT
Sequences:
>Translated_258_residues MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGA ALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMA HDDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE ADTPYPQMVERLQQRLLT >Mature_257_residues GELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGAA LSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMAH DDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALEA DTPYPQMVERLQQRLLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27219; Mature: 27088
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAP CCCCCCHHHCCCCCCEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC VQGAIEAAVLQALHLSVRGAALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCC TTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMAHDDGADTGFLTLRLGLSGAS HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH LSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHC ADTPYPQMVERLQQRLLT CCCCCHHHHHHHHHHHCC >Mature Secondary Structure GELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLNALGGQGEDLMRRLPAP CCCCCHHHCCCCCCEEHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCC VQGAIEAAVLQALHLSVRGAALSRRVVPDQPARTNRWVSTTMGMVGGAAGLPGALVELPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCC TTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMAHDDGADTGFLTLRLGLSGAS HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH LSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNYVYSGYYQEMAHVHFALRRLALE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHC ADTPYPQMVERLQQRLLT CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA