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The map label for this gene is yqaB [C]

Identifier: 99082137

GI number: 99082137

Start: 2416579

End: 2417223

Strand: Direct

Name: yqaB [C]

Synonym: TM1040_2297

Alternate gene names: 99082137

Gene position: 2416579-2417223 (Clockwise)

Preceding gene: 99082135

Following gene: 99082138

Centisome position: 75.5

GC content: 60.78

Gene sequence:

>645_bases
ATGGTCAAGCAATCCTTCTCTCACGTCGAACACTGGGTGTTCGATCTCGACAACACGCTCTATCACCCTTCTGCCCGTCT
GTTTGATCAGATCGAGGCCAAGATGATCACCTATGTGATGGAGACCCTCCAGATCGATCACGGGGCCGCCGACAAGCTGC
GTGGCGACTATTGGCGCAATCACGGCACCACGCTGGCGGGGCTGATGAAGGAACATGACATCGATCCCGACCCGTTTCTG
GTCGCGGTGCATGACATCTCGCTCGACCATCTGGAGCCGGACCAGACGCTCGCAGGTCACATCAAGGCACTCCCGGGGCG
CAAGATCGTCTACACCAACGGCTCTGCACCCTATGCAGAGCGCGTGCTGGCCGCGCGGGGGCTGACGGGGCTGTTTGACG
GGATATTTGGCGTCGAACATGCAGATTATCGCCCCAAACCCGAGCGCAGCGCCTTTGAACGGGTGTTTGAACGGGCCGGT
GTCGACACCACACGGGCGGCGATGTTCGAGGATGATCCACGCAACCTCAACGCGCCACACGCCATGGGGATGCGCACGGT
GCATGTGGCGCCCGAGGCCCACCCGGGCGATCACATCCACCATCACACCGAAGATCTGACCGCTTTTCTCGGTCAACTGC
GGTAG

Upstream 100 bases:

>100_bases
AATGTTCTACGCCCTGCCTGCGGGGCAATCAAGCCTGAGCCCCAAGGTCGCGCGTGCTATTGCATTGCGAATCCAAGGCA
TAGCGCCTAGGTCTCGGGCC

Downstream 100 bases:

>100_bases
CCTGTCGCAGCGACGAAAATGCACATGTCGCAGTCATCTTTGGCACCCTATATCGCGCAGAGACACGATATCACGGAGCC
TGCCATGACTGCTTACACAC

Product: pyrimidine 5-nucleotidase

Products: glycolate; phosphate

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVKQSFSHVEHWVFDLDNTLYHPSARLFDQIEAKMITYVMETLQIDHGAADKLRGDYWRNHGTTLAGLMKEHDIDPDPFL
VAVHDISLDHLEPDQTLAGHIKALPGRKIVYTNGSAPYAERVLAARGLTGLFDGIFGVEHADYRPKPERSAFERVFERAG
VDTTRAAMFEDDPRNLNAPHAMGMRTVHVAPEAHPGDHIHHHTEDLTAFLGQLR

Sequences:

>Translated_214_residues
MVKQSFSHVEHWVFDLDNTLYHPSARLFDQIEAKMITYVMETLQIDHGAADKLRGDYWRNHGTTLAGLMKEHDIDPDPFL
VAVHDISLDHLEPDQTLAGHIKALPGRKIVYTNGSAPYAERVLAARGLTGLFDGIFGVEHADYRPKPERSAFERVFERAG
VDTTRAAMFEDDPRNLNAPHAMGMRTVHVAPEAHPGDHIHHHTEDLTAFLGQLR
>Mature_214_residues
MVKQSFSHVEHWVFDLDNTLYHPSARLFDQIEAKMITYVMETLQIDHGAADKLRGDYWRNHGTTLAGLMKEHDIDPDPFL
VAVHDISLDHLEPDQTLAGHIKALPGRKIVYTNGSAPYAERVLAARGLTGLFDGIFGVEHADYRPKPERSAFERVFERAG
VDTTRAAMFEDDPRNLNAPHAMGMRTVHVAPEAHPGDHIHHHTEDLTAFLGQLR

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321214, Length=220, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320875, Length=187, Percent_Identity=26.2032085561497, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18

Molecular weight: Translated: 24130; Mature: 24130

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQSFSHVEHWVFDLDNTLYHPSARLFDQIEAKMITYVMETLQIDHGAADKLRGDYWRN
CCCCHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
HGTTLAGLMKEHDIDPDPFLVAVHDISLDHLEPDQTLAGHIKALPGRKIVYTNGSAPYAE
CCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHH
RVLAARGLTGLFDGIFGVEHADYRPKPERSAFERVFERAGVDTTRAAMFEDDPRNLNAPH
HHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCH
AMGMRTVHVAPEAHPGDHIHHHTEDLTAFLGQLR
HHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKQSFSHVEHWVFDLDNTLYHPSARLFDQIEAKMITYVMETLQIDHGAADKLRGDYWRN
CCCCHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
HGTTLAGLMKEHDIDPDPFLVAVHDISLDHLEPDQTLAGHIKALPGRKIVYTNGSAPYAE
CCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHH
RVLAARGLTGLFDGIFGVEHADYRPKPERSAFERVFERAGVDTTRAAMFEDDPRNLNAPH
HHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCH
AMGMRTVHVAPEAHPGDHIHHHTEDLTAFLGQLR
HHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-phosphoglycolate; H2O

Specific reaction: 2-phosphoglycolate + H2O = glycolate + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA