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The map label for this gene is ydaM [H]

Identifier: 99082135

GI number: 99082135

Start: 2414270

End: 2415799

Strand: Direct

Name: ydaM [H]

Synonym: TM1040_2295

Alternate gene names: 99082135

Gene position: 2414270-2415799 (Clockwise)

Preceding gene: 99082134

Following gene: 99082137

Centisome position: 75.42

GC content: 61.31

Gene sequence:

>1530_bases
ATGCTTGGCCGAACCGCACTGGTGCTGATGGCCGATCCCGCCAGCCTTGCCGCCCTAAGGCAGGATCTTCGGGGTCAATT
TGATGAGGTGATCCCAATTCCCACCCCCGCGGCAGAGATTGAGGCCATCTTGCTGAGGGCGCTTCAGGCACAGATGACAC
GGGAGGCTGCGCGCAGCGTTGCCCCCGCCCTCAGTTGCCGCAGCTTTGATTACCGCGCTGCCCGCGCCCCAGCCTTTGCA
ACGGGGACGCTTTTGTGTCTGTTTTCCATTCTCGCGCCGCATCTTGTGACTGCGGTGTTGGCTGTAGCGTCGCTTGTGAC
ATTGCTGATGTTCACGGCCCTCAGGATCTCCGGCCTCTTGGCGGCGGCACGCCCGGACCAGCCGAAATCCGAAACACCCA
AGGATCTGCCTCAGATGTCGATGCTGGTGCCGCTCTATCGTGAGGCGGAAATCGGCAAGCATCTCTTGCGCCGCCTGTGC
CGCCTCACCTATCCGCGCGACCGCCTTGAGGTATTGCTTGTCCTTGAGGAAAACGACGATGTGACCCGAAATGCCGTAAA
ATGCGCAGACCTGCCCGATTGGTTCCGGGTGGTCGAGGTGCCGGGCGACGGCACGCTCACCACAAAGCCGCGCGCAATGA
ACTATGCGCTGAATTTCTGCCGGGGAGAGATCATCGGGATCTGGGATGCTGAAGATGCCCCAGCGCCAGACCAACTCGAG
AGTGCGGCCAGCGCCTTTGCTCATGCCCCCCCCGACGTGGTGTGCTTTCAGGGAATTCTCGATTTCTACAATCCCAGCCG
CAATCTGATTTCGCGCTGCTTTACGCTCGAATATGCGGGATGGTTTCGCGTCCTGCTCCAAGGCATCGCGCGGCTGGGGC
TGGTGATCCCGCTTGGAGGCACCACGCTGTTTATCCGCCGCGACGCGCTCGAACAGCTGGGCGCGTGGGATGCACATAAC
GTCACCGAGGATGCCGACCTTGGCGTGCGGATTGCGCGCGCGTGCTATCGCACCGAAATGCTGCCCACAACCACCTATGA
AGAAGCCAACAGCCGCATCACGCCCTGGATCAAACAGCGGTCTCGCTGGCTGAAGGGGTTCATGATGACCTATCTGGTCC
ACATGCGCGCCCCAAAGGCACTGTTACGGGATGTCGGGTGGCGGCGTTTCTGGGGGCTACAGGCGTTCTTTCTGGGCACC
CTCGGGCAATTCCTGCTGGCACCAGTCCTCTGGAGCTTCTGGCTGGTGGCGCTCGGAGTATCGCATCCGCTCGAAGCGTC
ACTGCCCCGGGATATGCTGTCTGTCGCTGTCGGGGCGCTTGTGTTCTTTGAGGTGCTCAACCTGTGCATCTGGTATTGCG
GCGCACGGGCTTCGGGGCGGCCAGTCCTCGCGTTCTGCGCGCCCCTGATGCCTCTCTATTTCATACTTGGCTGTTTTGCC
GCCTACAAAGCCCTCTGGGAGGTGTTCGCAGCGCCGTTTTTCTGGGACAAGACCGCGCATGGGGATCATGGCGGCACCAC
AGAGCATTGA

Upstream 100 bases:

>100_bases
GGCAGCTGTGCAACGGATTGGGATTGATGAGCCTGACAAGGACATCCTGTCTCTGCGCCCACCCGCTTTTTGGATCAGGC
ATCAAGCGGTGCCACTGGAA

Downstream 100 bases:

>100_bases
CCTCAGCCGCCGCGTGCGCCCGCGTCCTGTTTCAATCGCGTGGTGAAGGCCACCGAGATATGATCCTTCAGCGCCTGCCC
TGCCGCCGCCTCATCCCGGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MLGRTALVLMADPASLAALRQDLRGQFDEVIPIPTPAAEIEAILLRALQAQMTREAARSVAPALSCRSFDYRAARAPAFA
TGTLLCLFSILAPHLVTAVLAVASLVTLLMFTALRISGLLAAARPDQPKSETPKDLPQMSMLVPLYREAEIGKHLLRRLC
RLTYPRDRLEVLLVLEENDDVTRNAVKCADLPDWFRVVEVPGDGTLTTKPRAMNYALNFCRGEIIGIWDAEDAPAPDQLE
SAASAFAHAPPDVVCFQGILDFYNPSRNLISRCFTLEYAGWFRVLLQGIARLGLVIPLGGTTLFIRRDALEQLGAWDAHN
VTEDADLGVRIARACYRTEMLPTTTYEEANSRITPWIKQRSRWLKGFMMTYLVHMRAPKALLRDVGWRRFWGLQAFFLGT
LGQFLLAPVLWSFWLVALGVSHPLEASLPRDMLSVAVGALVFFEVLNLCIWYCGARASGRPVLAFCAPLMPLYFILGCFA
AYKALWEVFAAPFFWDKTAHGDHGGTTEH

Sequences:

>Translated_509_residues
MLGRTALVLMADPASLAALRQDLRGQFDEVIPIPTPAAEIEAILLRALQAQMTREAARSVAPALSCRSFDYRAARAPAFA
TGTLLCLFSILAPHLVTAVLAVASLVTLLMFTALRISGLLAAARPDQPKSETPKDLPQMSMLVPLYREAEIGKHLLRRLC
RLTYPRDRLEVLLVLEENDDVTRNAVKCADLPDWFRVVEVPGDGTLTTKPRAMNYALNFCRGEIIGIWDAEDAPAPDQLE
SAASAFAHAPPDVVCFQGILDFYNPSRNLISRCFTLEYAGWFRVLLQGIARLGLVIPLGGTTLFIRRDALEQLGAWDAHN
VTEDADLGVRIARACYRTEMLPTTTYEEANSRITPWIKQRSRWLKGFMMTYLVHMRAPKALLRDVGWRRFWGLQAFFLGT
LGQFLLAPVLWSFWLVALGVSHPLEASLPRDMLSVAVGALVFFEVLNLCIWYCGARASGRPVLAFCAPLMPLYFILGCFA
AYKALWEVFAAPFFWDKTAHGDHGGTTEH
>Mature_509_residues
MLGRTALVLMADPASLAALRQDLRGQFDEVIPIPTPAAEIEAILLRALQAQMTREAARSVAPALSCRSFDYRAARAPAFA
TGTLLCLFSILAPHLVTAVLAVASLVTLLMFTALRISGLLAAARPDQPKSETPKDLPQMSMLVPLYREAEIGKHLLRRLC
RLTYPRDRLEVLLVLEENDDVTRNAVKCADLPDWFRVVEVPGDGTLTTKPRAMNYALNFCRGEIIGIWDAEDAPAPDQLE
SAASAFAHAPPDVVCFQGILDFYNPSRNLISRCFTLEYAGWFRVLLQGIARLGLVIPLGGTTLFIRRDALEQLGAWDAHN
VTEDADLGVRIARACYRTEMLPTTTYEEANSRITPWIKQRSRWLKGFMMTYLVHMRAPKALLRDVGWRRFWGLQAFFLGT
LGQFLLAPVLWSFWLVALGVSHPLEASLPRDMLSVAVGALVFFEVLNLCIWYCGARASGRPVLAFCAPLMPLYFILGCFA
AYKALWEVFAAPFFWDKTAHGDHGGTTEH

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 56597; Mature: 56597

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRTALVLMADPASLAALRQDLRGQFDEVIPIPTPAAEIEAILLRALQAQMTREAARSV
CCCCEEEEEEECCHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
APALSCRSFDYRAARAPAFATGTLLCLFSILAPHLVTAVLAVASLVTLLMFTALRISGLL
HHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARPDQPKSETPKDLPQMSMLVPLYREAEIGKHLLRRLCRLTYPRDRLEVLLVLEENDD
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
VTRNAVKCADLPDWFRVVEVPGDGTLTTKPRAMNYALNFCRGEIIGIWDAEDAPAPDQLE
HHHHHHHHCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
SAASAFAHAPPDVVCFQGILDFYNPSRNLISRCFTLEYAGWFRVLLQGIARLGLVIPLGG
HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
TTLFIRRDALEQLGAWDAHNVTEDADLGVRIARACYRTEMLPTTTYEEANSRITPWIKQR
CEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
SRWLKGFMMTYLVHMRAPKALLRDVGWRRFWGLQAFFLGTLGQFLLAPVLWSFWLVALGV
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SHPLEASLPRDMLSVAVGALVFFEVLNLCIWYCGARASGRPVLAFCAPLMPLYFILGCFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AYKALWEVFAAPFFWDKTAHGDHGGTTEH
HHHHHHHHHHCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLGRTALVLMADPASLAALRQDLRGQFDEVIPIPTPAAEIEAILLRALQAQMTREAARSV
CCCCEEEEEEECCHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
APALSCRSFDYRAARAPAFATGTLLCLFSILAPHLVTAVLAVASLVTLLMFTALRISGLL
HHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARPDQPKSETPKDLPQMSMLVPLYREAEIGKHLLRRLCRLTYPRDRLEVLLVLEENDD
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
VTRNAVKCADLPDWFRVVEVPGDGTLTTKPRAMNYALNFCRGEIIGIWDAEDAPAPDQLE
HHHHHHHHCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
SAASAFAHAPPDVVCFQGILDFYNPSRNLISRCFTLEYAGWFRVLLQGIARLGLVIPLGG
HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
TTLFIRRDALEQLGAWDAHNVTEDADLGVRIARACYRTEMLPTTTYEEANSRITPWIKQR
CEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
SRWLKGFMMTYLVHMRAPKALLRDVGWRRFWGLQAFFLGTLGQFLLAPVLWSFWLVALGV
HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SHPLEASLPRDMLSVAVGALVFFEVLNLCIWYCGARASGRPVLAFCAPLMPLYFILGCFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AYKALWEVFAAPFFWDKTAHGDHGGTTEH
HHHHHHHHHHCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]