Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082138

Identifier: 99082138

GI number: 99082138

Start: 2417308

End: 2417556

Strand: Direct

Name: 99082138

Synonym: TM1040_2298

Alternate gene names: NA

Gene position: 2417308-2417556 (Clockwise)

Preceding gene: 99082137

Following gene: 99082139

Centisome position: 75.52

GC content: 56.22

Gene sequence:

>249_bases
ATGACTGCTTACACACTGCCCCCCAAGCTCAGCACCTTTGAGCGGATCATGTTCCGCGTTCCGCTTCTGGGACGGATCTG
GAAGGAAGTCAGCTATGGCGACGAAGAAAACATCTACTATGCCATCGCGACCTTCCTGAGCCTCTGGGGCATCTCTGTCA
TGCTGTTTGGCCTGCCCGGCCTTTATCTGCCGGCATTGGCGCTGGTGCCGGTGATATGGATCCTTTTGATCCTGATTTCG
CGCGGCTGA

Upstream 100 bases:

>100_bases
CGGTCAACTGCGGTAGCCTGTCGCAGCGACGAAAATGCACATGTCGCAGTCATCTTTGGCACCCTATATCGCGCAGAGAC
ACGATATCACGGAGCCTGCC

Downstream 100 bases:

>100_bases
CCCTACCTGCGGCACAGCGCCGCTTGTGTTTCGCCCGCCCCGCGCCCTATGTCTCCTCCCATAGACATTGCGCGGGGCCG
AGGTGATGAACCAGACATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MTAYTLPPKLSTFERIMFRVPLLGRIWKEVSYGDEENIYYAIATFLSLWGISVMLFGLPGLYLPALALVPVIWILLILIS
RG

Sequences:

>Translated_82_residues
MTAYTLPPKLSTFERIMFRVPLLGRIWKEVSYGDEENIYYAIATFLSLWGISVMLFGLPGLYLPALALVPVIWILLILIS
RG
>Mature_81_residues
TAYTLPPKLSTFERIMFRVPLLGRIWKEVSYGDEENIYYAIATFLSLWGISVMLFGLPGLYLPALALVPVIWILLILISR
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9333; Mature: 9202

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYTLPPKLSTFERIMFRVPLLGRIWKEVSYGDEENIYYAIATFLSLWGISVMLFGLPG
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
LYLPALALVPVIWILLILISRG
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAYTLPPKLSTFERIMFRVPLLGRIWKEVSYGDEENIYYAIATFLSLWGISVMLFGLPG
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
LYLPALALVPVIWILLILISRG
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA