Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yqeY [H]

Identifier: 99082133

GI number: 99082133

Start: 2412068

End: 2412541

Strand: Reverse

Name: yqeY [H]

Synonym: TM1040_2293

Alternate gene names: 99082133

Gene position: 2412541-2412068 (Counterclockwise)

Preceding gene: 99082136

Following gene: 99082130

Centisome position: 75.37

GC content: 59.7

Gene sequence:

>474_bases
ATGGATACGCGAACTCGGGTCAACGAGGCCCTCAAACAGGCGATGAAGGACAAGGCGATGGAGCGTCTCTGCACTCTGCG
CCTGATCAATGCTGCCATCAAGGACCGTGAAATCGCTGCGCGCGGTGACGGGGAAGAAGGCGGCATCGGCGATGAAGAGA
TCCTCGCCATCCTCGGCAAGATGACCAAGCAGCGCAAGGAAAGCGTGCGCGCCTATGAGGAGGGCGGACGGCTCGACCTC
GCCGAGCGCGAGATGAACGAGATTGAGATCATTGAGGAATTCCTGCCCAAACAGCTCTCTGAGGATGAGGTGTCGAACGC
AGTGAAGGCCGCCGTTGATGAAACGGGTGCTGAATCCATCCGCGACATGGGCAAGGTCATGGGCGCGCTCAAGGCCAAAT
ACACCGGCCAGATGGACTTTGGCAAAGTGGGCCCGATGGTCAAGGATCAGCTCTGCTCGGCAGGGGGCTGCTGA

Upstream 100 bases:

>100_bases
CGATACCGGCCCTGCGTCTCGCACAATTGGGGGAGCTTGAATATTGCGGTGGATTTGAATAATACTGCCTCTTCTTGCTC
CACCTGGACGAAGAGAAAAC

Downstream 100 bases:

>100_bases
GGCCTTCGATTGCCATAACTGGCGTGGACATCGCGACGACAGATGAACCCCGGCTCTGACCCCAGAGCCGGGTTTTTTGT
ACCTGTGGCTTCGATGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDL
AEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC

Sequences:

>Translated_157_residues
MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDL
AEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC
>Mature_157_residues
MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDL
AEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC

Specific function: Unknown

COG id: COG1610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR019004 [H]

Pfam domain/function: PF09424 YqeY [H]

EC number: NA

Molecular weight: Translated: 17227; Mature: 17227

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MTKQRKESVRAYEEGGRLDLAEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC
HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDGEEGGIGDEEILAILGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MTKQRKESVRAYEEGGRLDLAEREMNEIEIIEEFLPKQLSEDEVSNAVKAAVDETGAESI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC
HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9023197 [H]