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The map label for this gene is ynjB [H]

Identifier: 99082091

GI number: 99082091

Start: 2365793

End: 2366992

Strand: Direct

Name: ynjB [H]

Synonym: TM1040_2251

Alternate gene names: 99082091

Gene position: 2365793-2366992 (Clockwise)

Preceding gene: 99082087

Following gene: 99082092

Centisome position: 73.91

GC content: 63.33

Gene sequence:

>1200_bases
ATGAAACGCATCTTGTCCCTTGCCCTCGCCCTTGCGCCGCTTTCGGCCTGGGCCACACCCGATCCGGCGGATTGGCCCGC
CGTGGTGGAAGATGCAAAAGGGCAGACGGTGCATTGGCATGCCTGGGGCGGCTCCACCGCGACCAATGACTTTATCGCCT
GGGTGGGCGAACGTCTTGAGGACGACTACGACATCACCCTCAACCATGTGAAACTCGAAAGCACCGCCGATGCGGTCACG
CGGGTGCTGACCGAGAAATCCGCGGGCCAGGATGACGATGGCGCGGTGGATCTCATCTGGATCAACGGGGCGAATTTCGC
CGCGATGAAGGACGCCGATCTGTTGTTTGGCCCCTTTGCCGAGGCCCTGCCCAACTGGCAGCTGGCCGACACCGAAAACA
AGACGCTGCAGCATGATTTCACCGTCCCCACCGAAGGCTACGAGTCCCCATGGGCGATGGCGCAGGTGGTCTTCATGCAT
GACACCGCCGACCTGCCCGAGCGGCTTGGCTCGATGGAGGCGCTGTTGGACTGGGCGCGCGAACATCCCGGTCGCTTCAC
CTATCCGCAGCCCCCGGATTTCCTCGGCACCACCTTTCTGAAACAGGCACTGGTTGACCTGAGCGACAATGCCGATGCGC
TGTCCAAGCCCGTGAATGAAGACAACTACCAAGAGGTCACTGCCCCGCTCTGGGCCTTTCTCGAAGAGCTGACGCCGCTG
TTGTGGCGCGAGGGGCGCGCCTATCCCGCCACTGGCCCGCGTCAGCTGCAGTTGATGAATGACGACGAGATTGATCTCGC
GATCTCTTTCAGCCCCGGCGAAGCGAGCACCGCCATCGCCAACTACCAGCTGCCCGAAAGCGTGCGCACCTTCGTGCTCG
ACAAGGGCACGATCGGCAATGCATCCTTTGTGGCGATCCCCTATAATTCCGGCTCCAAGGCGGCCTCCATGGTGGTTGCG
AACTTCCTGATGTCGCCCGAGGCCCAACTGCGCGCCCAGGACCCGGACGTTCTGGGCTATGGCACCGTGCTCGATCTCAA
TGCGCTCTCGGTGCAGGACCGCGCGGCCTTCCGCACGCTCGATCTCGGGATCGCCACCCTGACCCCCGAGGAACTCGGCC
CTGTGCAGCCTGAACCGCACCCCAGCTGGATGACCCGCATCTCCGAGGACTGGGTGGCGCGCTACGGCGTTGGCAACTGA

Upstream 100 bases:

>100_bases
ACCTTGCGCCGCGGATGGCGCAATCAGAGAGGGATTGCAGGGGCGCTCCCCGGAGGCGACGCCGACTGCAGCCGGATTTG
TCCCTTGAACGAGGATCGCC

Downstream 100 bases:

>100_bases
TCCCCAGATCACTCCCTGTGCGCCTCCCCCTCGCCCTGCCTCCGGTCTTGCCCGTCTTGACCATCCTGGTCCTGATCGGG
CCGGTTCTGGCGGGGCTGTG

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKRILSLALALAPLSAWATPDPADWPAVVEDAKGQTVHWHAWGGSTATNDFIAWVGERLEDDYDITLNHVKLESTADAVT
RVLTEKSAGQDDDGAVDLIWINGANFAAMKDADLLFGPFAEALPNWQLADTENKTLQHDFTVPTEGYESPWAMAQVVFMH
DTADLPERLGSMEALLDWAREHPGRFTYPQPPDFLGTTFLKQALVDLSDNADALSKPVNEDNYQEVTAPLWAFLEELTPL
LWREGRAYPATGPRQLQLMNDDEIDLAISFSPGEASTAIANYQLPESVRTFVLDKGTIGNASFVAIPYNSGSKAASMVVA
NFLMSPEAQLRAQDPDVLGYGTVLDLNALSVQDRAAFRTLDLGIATLTPEELGPVQPEPHPSWMTRISEDWVARYGVGN

Sequences:

>Translated_399_residues
MKRILSLALALAPLSAWATPDPADWPAVVEDAKGQTVHWHAWGGSTATNDFIAWVGERLEDDYDITLNHVKLESTADAVT
RVLTEKSAGQDDDGAVDLIWINGANFAAMKDADLLFGPFAEALPNWQLADTENKTLQHDFTVPTEGYESPWAMAQVVFMH
DTADLPERLGSMEALLDWAREHPGRFTYPQPPDFLGTTFLKQALVDLSDNADALSKPVNEDNYQEVTAPLWAFLEELTPL
LWREGRAYPATGPRQLQLMNDDEIDLAISFSPGEASTAIANYQLPESVRTFVLDKGTIGNASFVAIPYNSGSKAASMVVA
NFLMSPEAQLRAQDPDVLGYGTVLDLNALSVQDRAAFRTLDLGIATLTPEELGPVQPEPHPSWMTRISEDWVARYGVGN
>Mature_399_residues
MKRILSLALALAPLSAWATPDPADWPAVVEDAKGQTVHWHAWGGSTATNDFIAWVGERLEDDYDITLNHVKLESTADAVT
RVLTEKSAGQDDDGAVDLIWINGANFAAMKDADLLFGPFAEALPNWQLADTENKTLQHDFTVPTEGYESPWAMAQVVFMH
DTADLPERLGSMEALLDWAREHPGRFTYPQPPDFLGTTFLKQALVDLSDNADALSKPVNEDNYQEVTAPLWAFLEELTPL
LWREGRAYPATGPRQLQLMNDDEIDLAISFSPGEASTAIANYQLPESVRTFVLDKGTIGNASFVAIPYNSGSKAASMVVA
NFLMSPEAQLRAQDPDVLGYGTVLDLNALSVQDRAAFRTLDLGIATLTPEELGPVQPEPHPSWMTRISEDWVARYGVGN

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=375, Percent_Identity=42.4, Blast_Score=289, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43785; Mature: 43785

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILSLALALAPLSAWATPDPADWPAVVEDAKGQTVHWHAWGGSTATNDFIAWVGERLE
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC
DDYDITLNHVKLESTADAVTRVLTEKSAGQDDDGAVDLIWINGANFAAMKDADLLFGPFA
CCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCHHCCCHH
EALPNWQLADTENKTLQHDFTVPTEGYESPWAMAQVVFMHDTADLPERLGSMEALLDWAR
HHCCCCEEECCCCCEEEECCCCCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHH
EHPGRFTYPQPPDFLGTTFLKQALVDLSDNADALSKPVNEDNYQEVTAPLWAFLEELTPL
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LWREGRAYPATGPRQLQLMNDDEIDLAISFSPGEASTAIANYQLPESVRTFVLDKGTIGN
HHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHEECCCCCCC
ASFVAIPYNSGSKAASMVVANFLMSPEAQLRAQDPDVLGYGTVLDLNALSVQDRAAFRTL
CEEEEEECCCCCHHHHHHHHHHHHCCCHHHCCCCCCEEECCEEEECCCCCCHHHHHHHHE
DLGIATLTPEELGPVQPEPHPSWMTRISEDWVARYGVGN
CCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRILSLALALAPLSAWATPDPADWPAVVEDAKGQTVHWHAWGGSTATNDFIAWVGERLE
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC
DDYDITLNHVKLESTADAVTRVLTEKSAGQDDDGAVDLIWINGANFAAMKDADLLFGPFA
CCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCHHCCCHH
EALPNWQLADTENKTLQHDFTVPTEGYESPWAMAQVVFMHDTADLPERLGSMEALLDWAR
HHCCCCEEECCCCCEEEECCCCCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHH
EHPGRFTYPQPPDFLGTTFLKQALVDLSDNADALSKPVNEDNYQEVTAPLWAFLEELTPL
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LWREGRAYPATGPRQLQLMNDDEIDLAISFSPGEASTAIANYQLPESVRTFVLDKGTIGN
HHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHEECCCCCCC
ASFVAIPYNSGSKAASMVVANFLMSPEAQLRAQDPDVLGYGTVLDLNALSVQDRAAFRTL
CEEEEEECCCCCHHHHHHHHHHHHCCCHHHCCCCCCEEECCEEEECCCCCCHHHHHHHHE
DLGIATLTPEELGPVQPEPHPSWMTRISEDWVARYGVGN
CCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]