| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082040
Identifier: 99082040
GI number: 99082040
Start: 2311172
End: 2311459
Strand: Direct
Name: 99082040
Synonym: TM1040_2200
Alternate gene names: NA
Gene position: 2311172-2311459 (Clockwise)
Preceding gene: 99082039
Following gene: 99082041
Centisome position: 72.2
GC content: 53.47
Gene sequence:
>288_bases ATGATCATCTGCCACTGCACCGCCATTTCGGATCACGACATTCATGCAGCGATTGACTGGATGCGTGCCTCTGACCCACA AACCATTATCACTCCTGGGAAAATCTACCGCGCCTTGGGCAAGCAGGCGGAATGCGGAGGCTGCATGCCGCTCTTTCTGG ACACGATGCGCGCCAACGCTAAGGTGGTTGTACCTGCACAGTTGCAGAACTTGCGTACAGCCATTTCTCCGGAGAGCAAT TATGAAGGGCGACCCCAAAGTCATCGAATATCTCAACAAGGCACTTAG
Upstream 100 bases:
>100_bases GATCAAAACAGTCCGATTTACCCTTGAAAGCTTATTCTTTTACTCGGATATTGATTCAAAGCCTGTAGCTTACAGAATCT CTTGGGATCGACGCCCCGCC
Downstream 100 bases:
>100_bases GAGCGAGCTGACTGCTGTCAGCCAGTACTGGCTGCACTACCGGCTCCAGGCGGACTGGGGCCTTGGGCACATGGCCAAGA AGAGCCGCGAGGAAAGCATC
Product: putative bacterioferritin-associated ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MIICHCTAISDHDIHAAIDWMRASDPQTIITPGKIYRALGKQAECGGCMPLFLDTMRANAKVVVPAQLQNLRTAISPESN YEGRPQSHRISQQGT
Sequences:
>Translated_95_residues MIICHCTAISDHDIHAAIDWMRASDPQTIITPGKIYRALGKQAECGGCMPLFLDTMRANAKVVVPAQLQNLRTAISPESN YEGRPQSHRISQQGT >Mature_95_residues MIICHCTAISDHDIHAAIDWMRASDPQTIITPGKIYRALGKQAECGGCMPLFLDTMRANAKVVVPAQLQNLRTAISPESN YEGRPQSHRISQQGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10447; Mature: 10447
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIICHCTAISDHDIHAAIDWMRASDPQTIITPGKIYRALGKQAECGGCMPLFLDTMRANA CEEEEEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCC KVVVPAQLQNLRTAISPESNYEGRPQSHRISQQGT EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIICHCTAISDHDIHAAIDWMRASDPQTIITPGKIYRALGKQAECGGCMPLFLDTMRANA CEEEEEECCCCCCCHHHHHHHCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCC KVVVPAQLQNLRTAISPESNYEGRPQSHRISQQGT EEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA