Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99082039

Identifier: 99082039

GI number: 99082039

Start: 2309674

End: 2310942

Strand: Direct

Name: 99082039

Synonym: TM1040_2199

Alternate gene names: NA

Gene position: 2309674-2310942 (Clockwise)

Preceding gene: 99082038

Following gene: 99082040

Centisome position: 72.16

GC content: 62.02

Gene sequence:

>1269_bases
ATGAAAACGCCGCTTTTCACCGGTGCTGCCGTGTTGGCTCTGGCCGCAGGGACCTCTGCTGCATTCGCCACGTCCAAGGG
CGAAGTGCTGATCAACTACGCCAATATCGCCGAAGCAAAATACGAGGACAGCCTGATCACGGCCAAGACGCTTCAGGCGG
CGGTTGGGGCCCTGATCGACGCGCCCTCCGCCGAGACCCTCGCCGCTGCCAAAAAGGCTTGGCTGGCTGCCCGGGTGCCT
TATCAGCAGACTGAAGTCTATCGTTTTGGCAATGCCATCGTTGACGACTGGGAAGGCAAAGTGAACGCATGGCCTCTGGA
TGAGGGTCTCATCGACTATGTGGATGCCTCTTATGGCGGCCCCACGGATGAAAACGCCGCAGCAGTGCTCAATGTGGTCG
CAAACCCCGATTTCAGCCTGTCAGGCCAGGCGATCGATGCGTCCGAGATCACGCCCGAGCTGCTGGCAGAGACCCTGCAC
GAAGCGGACGGCGTCGAAGCAAATGTCGCCACCGGCTACCACGCCATTGAATTTCTGCTCTGGGGGCAGGACCTGAACGG
CACCGAGCATGGCGCCGGCGCGCGGGCATGGACCGATTACGCCACTGGCGAAGACTGCACCAACGGCAATTGTGACCGTC
GGGGCGCTTACCTCAAAGCGGCCACCGATCTGTTGGTATCGGATCTCGAGTGGATCACTGCGCAATGGGCCGAGGGGGGC
GCCGCGCGCGCCGAGGTGCTCTCTGACGAGAACGCGGGCATAACCGCAATTCTGACCGGCATGGGCTCACTGTCCTATGG
GGAACAGGCTGGCGAGCGCATGCGTCTGGGCCTGATGCTGAACGATCCCGAGGAAGAGCATGACTGTTTCTCCGACAACA
CCCACAACAGCCACTATTACGATGGGCTGGGCATCCAGAACGTCTATCTGGGTGAATACGTGCGGGTGAACGGTGCGTTG
GTCTCTGGTGCCGCGCTCGCGGATCTGGTCGAAGCCGCCGATCCCGCTTTGAACAGCGAACTCACCGCCAAGCTCGCCAC
CACCATGATGAAGCTCGGTCGCATCAAGACCGCTGCCGAGGCGGGTTTCTCCTATGACCAGATGCTCGCGCAGGGCAGCA
CGGCGGGCGAGGCCCTGGTCATGGGCGGCGTTGACGCGCTCGTGGACCAGACCCGTTCAATCGAACGTGTGGTGGCGGCG
CTGGAACTCGACGCCGTCTCCATTGAGGGCTCGGATTCGCTGGACGACCCCTCGGCGGTCTTTCACTAA

Upstream 100 bases:

>100_bases
CTATTCGCTGCGGATCACCCGCGCGGGCAAGCTGATTTTGACCAAGTGACCCCACAGGCGCCCCGCGCCTCTTTTTCAAA
ATTCCAACGAGGATGATTTT

Downstream 100 bases:

>100_bases
CGCAGGTCCGGTCCCCGATCTGTCCGGAGTCGCGCCTTGGCGCGGCTCCATTTTTGATACTCGGACCTGAGTTTTTGCCA
CCCAAAGCCTGTATGCGGCC

Product: imelysin

Products: NA

Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKTPLFTGAAVLALAAGTSAAFATSKGEVLINYANIAEAKYEDSLITAKTLQAAVGALIDAPSAETLAAAKKAWLAARVP
YQQTEVYRFGNAIVDDWEGKVNAWPLDEGLIDYVDASYGGPTDENAAAVLNVVANPDFSLSGQAIDASEITPELLAETLH
EADGVEANVATGYHAIEFLLWGQDLNGTEHGAGARAWTDYATGEDCTNGNCDRRGAYLKAATDLLVSDLEWITAQWAEGG
AARAEVLSDENAGITAILTGMGSLSYGEQAGERMRLGLMLNDPEEEHDCFSDNTHNSHYYDGLGIQNVYLGEYVRVNGAL
VSGAALADLVEAADPALNSELTAKLATTMMKLGRIKTAAEAGFSYDQMLAQGSTAGEALVMGGVDALVDQTRSIERVVAA
LELDAVSIEGSDSLDDPSAVFH

Sequences:

>Translated_422_residues
MKTPLFTGAAVLALAAGTSAAFATSKGEVLINYANIAEAKYEDSLITAKTLQAAVGALIDAPSAETLAAAKKAWLAARVP
YQQTEVYRFGNAIVDDWEGKVNAWPLDEGLIDYVDASYGGPTDENAAAVLNVVANPDFSLSGQAIDASEITPELLAETLH
EADGVEANVATGYHAIEFLLWGQDLNGTEHGAGARAWTDYATGEDCTNGNCDRRGAYLKAATDLLVSDLEWITAQWAEGG
AARAEVLSDENAGITAILTGMGSLSYGEQAGERMRLGLMLNDPEEEHDCFSDNTHNSHYYDGLGIQNVYLGEYVRVNGAL
VSGAALADLVEAADPALNSELTAKLATTMMKLGRIKTAAEAGFSYDQMLAQGSTAGEALVMGGVDALVDQTRSIERVVAA
LELDAVSIEGSDSLDDPSAVFH
>Mature_422_residues
MKTPLFTGAAVLALAAGTSAAFATSKGEVLINYANIAEAKYEDSLITAKTLQAAVGALIDAPSAETLAAAKKAWLAARVP
YQQTEVYRFGNAIVDDWEGKVNAWPLDEGLIDYVDASYGGPTDENAAAVLNVVANPDFSLSGQAIDASEITPELLAETLH
EADGVEANVATGYHAIEFLLWGQDLNGTEHGAGARAWTDYATGEDCTNGNCDRRGAYLKAATDLLVSDLEWITAQWAEGG
AARAEVLSDENAGITAILTGMGSLSYGEQAGERMRLGLMLNDPEEEHDCFSDNTHNSHYYDGLGIQNVYLGEYVRVNGAL
VSGAALADLVEAADPALNSELTAKLATTMMKLGRIKTAAEAGFSYDQMLAQGSTAGEALVMGGVDALVDQTRSIERVVAA
LELDAVSIEGSDSLDDPSAVFH

Specific function: Unknown

COG id: COG3487

COG function: function code P; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44354; Mature: 44354

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPLFTGAAVLALAAGTSAAFATSKGEVLINYANIAEAKYEDSLITAKTLQAAVGALID
CCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHC
APSAETLAAAKKAWLAARVPYQQTEVYRFGNAIVDDWEGKVNAWPLDEGLIDYVDASYGG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCEECCCCCCCHHHHHHCCCCC
PTDENAAAVLNVVANPDFSLSGQAIDASEITPELLAETLHEADGVEANVATGYHAIEFLL
CCCCCCEEEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCEEHHCCCEEEEEEE
WGQDLNGTEHGAGARAWTDYATGEDCTNGNCDRRGAYLKAATDLLVSDLEWITAQWAEGG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
AARAEVLSDENAGITAILTGMGSLSYGEQAGERMRLGLMLNDPEEEHDCFSDNTHNSHYY
CHHHHHHCCCCCCEEEEEECCCCCCCCHHCCCEEEEEEEECCCCHHHHCCCCCCCCCEEE
DGLGIQNVYLGEYVRVNGALVSGAALADLVEAADPALNSELTAKLATTMMKLGRIKTAAE
CCCCCCEEEECCEEEECCEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGFSYDQMLAQGSTAGEALVMGGVDALVDQTRSIERVVAALELDAVSIEGSDSLDDPSAV
CCCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHC
FH
CC
>Mature Secondary Structure
MKTPLFTGAAVLALAAGTSAAFATSKGEVLINYANIAEAKYEDSLITAKTLQAAVGALID
CCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHC
APSAETLAAAKKAWLAARVPYQQTEVYRFGNAIVDDWEGKVNAWPLDEGLIDYVDASYGG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCEECCCCCCCHHHHHHCCCCC
PTDENAAAVLNVVANPDFSLSGQAIDASEITPELLAETLHEADGVEANVATGYHAIEFLL
CCCCCCEEEEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCEEHHCCCEEEEEEE
WGQDLNGTEHGAGARAWTDYATGEDCTNGNCDRRGAYLKAATDLLVSDLEWITAQWAEGG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
AARAEVLSDENAGITAILTGMGSLSYGEQAGERMRLGLMLNDPEEEHDCFSDNTHNSHYY
CHHHHHHCCCCCCEEEEEECCCCCCCCHHCCCEEEEEEEECCCCHHHHCCCCCCCCCEEE
DGLGIQNVYLGEYVRVNGALVSGAALADLVEAADPALNSELTAKLATTMMKLGRIKTAAE
CCCCCCEEEECCEEEECCEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AGFSYDQMLAQGSTAGEALVMGGVDALVDQTRSIERVVAALELDAVSIEGSDSLDDPSAV
CCCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHC
FH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA