| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082016
Identifier: 99082016
GI number: 99082016
Start: 2288500
End: 2288895
Strand: Reverse
Name: 99082016
Synonym: TM1040_2176
Alternate gene names: NA
Gene position: 2288895-2288500 (Counterclockwise)
Preceding gene: 99082017
Following gene: 99082015
Centisome position: 71.51
GC content: 64.14
Gene sequence:
>396_bases ATGGGTAACAAGCTAAATAGCCAGACCGAAATTGACGATCTCGACGCACTCTTTGCCGAGGCGCGCGCGACCCGTCCCGA GGTGCCCGCCTCCCTGATGGAGTCCATCCTCGCCGATGCAGCCGACGCGCAGGCGGGGCACCTCAGCAGCACCGCGACAG AGCCTCCTCGGCGTGGCCCGATTGAGGTTCTGATTGCAGCGCTGGGGGGCTGGCCGTCGCTGGGGGGGCTGGTGGCCGCG AGTTGCGTCGGGCTCTGGGTCGGGATCAATGCACCGGACCTGATGCTGGAAACGCCGGGCTTGCAGACGCTGGCCCGCAC AGGCAGTGAGACAACAGACTATGCGGCCTATGAAACTTTTGATCTGGCCACGGTGCTGGCTGAGGATTTGCAATGA
Upstream 100 bases:
>100_bases ATGGAGATCAGCGTGGAGGCCGTGGAAAGCCTGACCGCACGGGGCAAACGCGCTTTGGCCGCAGCATTGGCGGGTCGGCG CGAGGAATTGGGGTATCAAG
Downstream 100 bases:
>100_bases TACATACAGCTGAACCCAAGGGGATTTCGCGGATGCCACGCTGGCTGAAGGCCGTGTTTGCGCTGTCGCTTGCGGGCAAT CTCGCGGTGGTGGGGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAA SCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETFDLATVLAEDLQ
Sequences:
>Translated_131_residues MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAA SCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETFDLATVLAEDLQ >Mature_130_residues GNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAAS CVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETFDLATVLAEDLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13639; Mature: 13508
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGP CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH IEVLIAALGGWPSLGGLVAASCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHH DLATVLAEDLQ HHHHHHHHHCC >Mature Secondary Structure GNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGP CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH IEVLIAALGGWPSLGGLVAASCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHH DLATVLAEDLQ HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA