Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082016

Identifier: 99082016

GI number: 99082016

Start: 2288500

End: 2288895

Strand: Reverse

Name: 99082016

Synonym: TM1040_2176

Alternate gene names: NA

Gene position: 2288895-2288500 (Counterclockwise)

Preceding gene: 99082017

Following gene: 99082015

Centisome position: 71.51

GC content: 64.14

Gene sequence:

>396_bases
ATGGGTAACAAGCTAAATAGCCAGACCGAAATTGACGATCTCGACGCACTCTTTGCCGAGGCGCGCGCGACCCGTCCCGA
GGTGCCCGCCTCCCTGATGGAGTCCATCCTCGCCGATGCAGCCGACGCGCAGGCGGGGCACCTCAGCAGCACCGCGACAG
AGCCTCCTCGGCGTGGCCCGATTGAGGTTCTGATTGCAGCGCTGGGGGGCTGGCCGTCGCTGGGGGGGCTGGTGGCCGCG
AGTTGCGTCGGGCTCTGGGTCGGGATCAATGCACCGGACCTGATGCTGGAAACGCCGGGCTTGCAGACGCTGGCCCGCAC
AGGCAGTGAGACAACAGACTATGCGGCCTATGAAACTTTTGATCTGGCCACGGTGCTGGCTGAGGATTTGCAATGA

Upstream 100 bases:

>100_bases
ATGGAGATCAGCGTGGAGGCCGTGGAAAGCCTGACCGCACGGGGCAAACGCGCTTTGGCCGCAGCATTGGCGGGTCGGCG
CGAGGAATTGGGGTATCAAG

Downstream 100 bases:

>100_bases
TACATACAGCTGAACCCAAGGGGATTTCGCGGATGCCACGCTGGCTGAAGGCCGTGTTTGCGCTGTCGCTTGCGGGCAAT
CTCGCGGTGGTGGGGATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAA
SCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETFDLATVLAEDLQ

Sequences:

>Translated_131_residues
MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAA
SCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETFDLATVLAEDLQ
>Mature_130_residues
GNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAAS
CVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETFDLATVLAEDLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13639; Mature: 13508

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGP
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
IEVLIAALGGWPSLGGLVAASCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHH
DLATVLAEDLQ
HHHHHHHHHCC
>Mature Secondary Structure 
GNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQAGHLSSTATEPPRRGP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
IEVLIAALGGWPSLGGLVAASCVGLWVGINAPDLMLETPGLQTLARTGSETTDYAAYETF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHH
DLATVLAEDLQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA