Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082015

Identifier: 99082015

GI number: 99082015

Start: 2287994

End: 2288503

Strand: Reverse

Name: 99082015

Synonym: TM1040_2175

Alternate gene names: NA

Gene position: 2288503-2287994 (Counterclockwise)

Preceding gene: 99082016

Following gene: 99082013

Centisome position: 71.49

GC content: 62.75

Gene sequence:

>510_bases
ATGATACATACAGCTGAACCCAAGGGGATTTCGCGGATGCCACGCTGGCTGAAGGCCGTGTTTGCGCTGTCGCTTGCGGG
CAATCTCGCGGTGGTGGGGATCATGGTGGGTGCCGCGCTGCGCGAGGGTCGTCCCGGTCCGCATCGCCACAAGGCTCCAC
CTCCTGCGGCGGCAGATGCAATCGGGGCGGTGATGTATCGCTCCTTTGATGATGCGGAGCGGCGCGCATTGCGCAGGCTC
GCAAGTGGCAAGCACGGCGACATTGTCGAGCGGCGGCTGGCCGAACTCAATGTGCTGCTGGAGGTGATCCAGCAGGACCC
GCTTGATGCCGATCGCCTGCGCGCCGAGATCGACGCCCAGAGCCAGTCCGCGCAGGCCTTCCGCAGTTCCATGCATGAGG
TCTGGATTGCAGAGCTGCAGAAGATGACGCCCGCAGAGCGTGCAGGTTTTGCCGAAAAGGTAAGGGACCACATTGCACGG
TTTCGCAAGCCACGCGAAGATCGTCCATAA

Upstream 100 bases:

>100_bases
CGCCGGGCTTGCAGACGCTGGCCCGCACAGGCAGTGAGACAACAGACTATGCGGCCTATGAAACTTTTGATCTGGCCACG
GTGCTGGCTGAGGATTTGCA

Downstream 100 bases:

>100_bases
TCCCGGAAGGACGCGTGATCTGCAGATCTTATGGATGCAGAGGGATCAGGCGGCGGCGCTCTGTGTGAGCCCCTTGATCG
CGGCCTGGTTACGGCCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MIHTAEPKGISRMPRWLKAVFALSLAGNLAVVGIMVGAALREGRPGPHRHKAPPPAAADAIGAVMYRSFDDAERRALRRL
ASGKHGDIVERRLAELNVLLEVIQQDPLDADRLRAEIDAQSQSAQAFRSSMHEVWIAELQKMTPAERAGFAEKVRDHIAR
FRKPREDRP

Sequences:

>Translated_169_residues
MIHTAEPKGISRMPRWLKAVFALSLAGNLAVVGIMVGAALREGRPGPHRHKAPPPAAADAIGAVMYRSFDDAERRALRRL
ASGKHGDIVERRLAELNVLLEVIQQDPLDADRLRAEIDAQSQSAQAFRSSMHEVWIAELQKMTPAERAGFAEKVRDHIAR
FRKPREDRP
>Mature_169_residues
MIHTAEPKGISRMPRWLKAVFALSLAGNLAVVGIMVGAALREGRPGPHRHKAPPPAAADAIGAVMYRSFDDAERRALRRL
ASGKHGDIVERRLAELNVLLEVIQQDPLDADRLRAEIDAQSQSAQAFRSSMHEVWIAELQKMTPAERAGFAEKVRDHIAR
FRKPREDRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18825; Mature: 18825

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHTAEPKGISRMPRWLKAVFALSLAGNLAVVGIMVGAALREGRPGPHRHKAPPPAAADA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
IGAVMYRSFDDAERRALRRLASGKHGDIVERRLAELNVLLEVIQQDPLDADRLRAEIDAQ
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SQSAQAFRSSMHEVWIAELQKMTPAERAGFAEKVRDHIARFRKPREDRP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIHTAEPKGISRMPRWLKAVFALSLAGNLAVVGIMVGAALREGRPGPHRHKAPPPAAADA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
IGAVMYRSFDDAERRALRRLASGKHGDIVERRLAELNVLLEVIQQDPLDADRLRAEIDAQ
HHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SQSAQAFRSSMHEVWIAELQKMTPAERAGFAEKVRDHIARFRKPREDRP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA