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The map label for this gene is ybgK [C]

Identifier: 99081896

GI number: 99081896

Start: 2159766

End: 2160791

Strand: Reverse

Name: ybgK [C]

Synonym: TM1040_2056

Alternate gene names: 99081896

Gene position: 2160791-2159766 (Counterclockwise)

Preceding gene: 99081897

Following gene: 99081895

Centisome position: 67.5

GC content: 65.5

Gene sequence:

>1026_bases
ATGAGCGTGCGCCTTATTGTTCACCGCGCAGGACCGGGTCTGAGCATTCAGGATCTTGGCCGTAGCGGCTATCTCGCCTT
TGGTCTGTCGCGCGGTGGCGCGGCGGATCGGCTGGCGCTTTATGAGGGCGCGGCGCTCTTGGGACAGGAACCAAGCGCGG
CGGCCATCGAGATGGCCGGGCTTGGCGGCACATTTGAGGTCACAACCGATACCCGTATCGCCCTCACAGGTGCGCCGATG
AAGGCCACGCTACAGGACGGCTCGGAATTGCGCTGGAATGCCAGCCACCTTCTTGCGGCCGGGATGCAGCTCAGCATTGG
CGCAGTGCGGGCGGGGTCGTATGGCTACCTTCATGTGGGCGGCGGCATCGCAAACGCGCTGCAGCTTGGCGCGCGCAGTG
CGCATCTCGCCTCGGGGCTTGGCGCACGTCTCCGGGATGGGGCGGAGCTGCCCCTTGGTGACGATGCAGGGGGTGCAGTC
AATATGACCCTGACCCCCGAGCCGCGCCTGGACGGCGGCACGCTGCGCATGGTGCCAAGCCTGCAAACCAGCCTTTTTGG
CGCGGCAGAGGTGGCCCGCTTTCAAGAGGTACGCTTTCACCGTGACAGCCGCGCCAATCGCATGGGGGTGCGGCTCTTGC
CGGAGGGGCAGGGGTTTGCGCTTGAGGGGGGCTTGAGCGTTCTTTCCGAGGTGATCGCACCCGGTGACATTCAGGTCACC
GGCGATGGCACGCCCTATGTTTTGATGAGCGAATGCCAGACCACCGGCGGCTATCCCCGCATCGGCTCTGTTCTGCCTTG
CGATATGCCGCGCGTGGCACAGGCACAGGCAGGAGCGGCGTTTCGCTTTGAACAGGTGACACTTGAGGAAGCGGTCGAGA
TTGAACGGCGGGCCCGCGCCGAGCGCGAGCGTCTGCCCTCCCGGCTGACGCCGCTTGTGCGTGATCCGGCCCGAATGCGG
GATCTTCTGTCCTATCAACTGGTGAGCGGCGTGACCGCCGGGCGCGATCTTGATGAGGCGCTCTGA

Upstream 100 bases:

>100_bases
GTCCGGGCGATGAAGTGCTGTTTGAGCCCATCTCGCCCGAACGCTACGCCGCGCTCGAGCGCGCGGGAGTGGATGGTGGC
GCCACCTCCGAGGTGCTGAC

Downstream 100 bases:

>100_bases
GCGCGCTGCGGACGCAAACGAACGAAGGAGGGCCATGGGCCATGACATCTACCGTAGATCTGAATGCCGACATGGGCGAG
AGCTTTGGCCCGTGGGTGAT

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSVRLIVHRAGPGLSIQDLGRSGYLAFGLSRGGAADRLALYEGAALLGQEPSAAAIEMAGLGGTFEVTTDTRIALTGAPM
KATLQDGSELRWNASHLLAAGMQLSIGAVRAGSYGYLHVGGGIANALQLGARSAHLASGLGARLRDGAELPLGDDAGGAV
NMTLTPEPRLDGGTLRMVPSLQTSLFGAAEVARFQEVRFHRDSRANRMGVRLLPEGQGFALEGGLSVLSEVIAPGDIQVT
GDGTPYVLMSECQTTGGYPRIGSVLPCDMPRVAQAQAGAAFRFEQVTLEEAVEIERRARAERERLPSRLTPLVRDPARMR
DLLSYQLVSGVTAGRDLDEAL

Sequences:

>Translated_341_residues
MSVRLIVHRAGPGLSIQDLGRSGYLAFGLSRGGAADRLALYEGAALLGQEPSAAAIEMAGLGGTFEVTTDTRIALTGAPM
KATLQDGSELRWNASHLLAAGMQLSIGAVRAGSYGYLHVGGGIANALQLGARSAHLASGLGARLRDGAELPLGDDAGGAV
NMTLTPEPRLDGGTLRMVPSLQTSLFGAAEVARFQEVRFHRDSRANRMGVRLLPEGQGFALEGGLSVLSEVIAPGDIQVT
GDGTPYVLMSECQTTGGYPRIGSVLPCDMPRVAQAQAGAAFRFEQVTLEEAVEIERRARAERERLPSRLTPLVRDPARMR
DLLSYQLVSGVTAGRDLDEAL
>Mature_340_residues
SVRLIVHRAGPGLSIQDLGRSGYLAFGLSRGGAADRLALYEGAALLGQEPSAAAIEMAGLGGTFEVTTDTRIALTGAPMK
ATLQDGSELRWNASHLLAAGMQLSIGAVRAGSYGYLHVGGGIANALQLGARSAHLASGLGARLRDGAELPLGDDAGGAVN
MTLTPEPRLDGGTLRMVPSLQTSLFGAAEVARFQEVRFHRDSRANRMGVRLLPEGQGFALEGGLSVLSEVIAPGDIQVTG
DGTPYVLMSECQTTGGYPRIGSVLPCDMPRVAQAQAGAAFRFEQVTLEEAVEIERRARAERERLPSRLTPLVRDPARMRD
LLSYQLVSGVTAGRDLDEAL

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=310, Percent_Identity=34.5161290322581, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 35830; Mature: 35699

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLIVHRAGPGLSIQDLGRSGYLAFGLSRGGAADRLALYEGAALLGQEPSAAAIEMAG
CCEEEEEEECCCCCCHHHCCCCCEEEEEECCCCCCCEEHHCCCHHHHCCCCCCCEEEEEC
LGGTFEVTTDTRIALTGAPMKATLQDGSELRWNASHLLAAGMQLSIGAVRAGSYGYLHVG
CCCEEEEECCCEEEEECCCCEEECCCCCCEEECHHHHHHCCCEEEEEEEECCCEEEEEEC
GGIANALQLGARSAHLASGLGARLRDGAELPLGDDAGGAVNMTLTPEPRLDGGTLRMVPS
CCHHHHHHHCCCHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCC
LQTSLFGAAEVARFQEVRFHRDSRANRMGVRLLPEGQGFALEGGLSVLSEVIAPGDIQVT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCEEEE
GDGTPYVLMSECQTTGGYPRIGSVLPCDMPRVAQAQAGAAFRFEQVTLEEAVEIERRARA
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH
ERERLPSRLTPLVRDPARMRDLLSYQLVSGVTAGRDLDEAL
HHHHCHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
SVRLIVHRAGPGLSIQDLGRSGYLAFGLSRGGAADRLALYEGAALLGQEPSAAAIEMAG
CEEEEEEECCCCCCHHHCCCCCEEEEEECCCCCCCEEHHCCCHHHHCCCCCCCEEEEEC
LGGTFEVTTDTRIALTGAPMKATLQDGSELRWNASHLLAAGMQLSIGAVRAGSYGYLHVG
CCCEEEEECCCEEEEECCCCEEECCCCCCEEECHHHHHHCCCEEEEEEEECCCEEEEEEC
GGIANALQLGARSAHLASGLGARLRDGAELPLGDDAGGAVNMTLTPEPRLDGGTLRMVPS
CCHHHHHHHCCCHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCC
LQTSLFGAAEVARFQEVRFHRDSRANRMGVRLLPEGQGFALEGGLSVLSEVIAPGDIQVT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCEEEE
GDGTPYVLMSECQTTGGYPRIGSVLPCDMPRVAQAQAGAAFRFEQVTLEEAVEIERRARA
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH
ERERLPSRLTPLVRDPARMRDLLSYQLVSGVTAGRDLDEAL
HHHHCHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]